BSD Portsbiology/py-deeptools 3.5.2_1 DragonFly
User-friendly tools for exploring deep-sequencing data
- System
- DragonFly
- Repository
- DPorts
- Maintainer
- [email protected] (as in FreeBSD)
- License
- BSD3CLAUSE
- Categories
- biology, python
- Package size
- 362.8 KiB, 2475.1 KiB installed
Description
deepTools contains useful modules to process the mapped reads data for multiple quality checks, creating normalized coverage files in standard bedGraph and bigWig file formats, that allow comparison between different files (for example, treatment and control). Finally, using such normalized and standardized files, deepTools can create many publication-ready visualizations to identify enrichments and for functional annotations of the genome.
In the other systems
The newest version among them is 3.5.6, as upstream numbers it.
| System | Port | Version | Vulnerabilities | Status | Maintainer | Last update |
|---|---|---|---|---|---|---|
| DragonFly | biology/py-deeptools | 3.5.2_1 | none known | - | [email protected] | - |
| FreeBSD | biology/py-deeptools | 3.5.6 newest | none known | - | [email protected] | 2026-10-08 |
| HardenedBSD | biology/py-deeptools | 3.5.6 newest | no data | - | [email protected] | - |
| GhostBSD | biology/py-deeptools | 3.5.6 newest | no data | - | [email protected] | - |
Install
Binary package:
pkg install py311-deepToolsFrom DPorts:
cd /usr/dports/biology/py-deeptools && make install cleanDependencies
Run dependencies 10
No port depends on this one.