BSD Portsbiology/py-gffutils 0.13_1 DragonFly
Work with GFF and GTF files in a flexible database framework
- System
- DragonFly
- Repository
- DPorts
- Maintainer
- [email protected] (as in FreeBSD)
- License
- MIT
- Categories
- biology, python
- Package size
- 1109.7 KiB, 10487.3 KiB installed
Description
gffutils is a Python package for working with and manipulating the GFF and GTF format files typically used for genomic annotations. Files are loaded into a sqlite3 database, allowing much more complex manipulation of hierarchical features (e.g., genes, transcripts, and exons) than is possible with plain-text methods alone.
In the other systems
| System | Port | Version |
|---|---|---|
| DragonFly | biology/py-gffutils | 0.13_1 |
| FreeBSD | biology/py-gffutils | 0.14 |
| HardenedBSD | biology/py-gffutils | 0.14 |
| GhostBSD | biology/py-gffutils | 0.14 |
Install
Binary package:
pkg install py311-gffutilsFrom DPorts:
cd /usr/dports/biology/py-gffutils && make install cleanDependencies
Run dependencies 6
No port depends on this one.