BSD Portsbiology/py-macs3 3.0.3 DragonFly
Peak caller aimed at transcription factor binding sites
- System
- DragonFly
- Repository
- DPorts
- Maintainer
- [email protected] (as in FreeBSD)
- License
- BSD3CLAUSE
- Categories
- biology, python
- Package size
- 1962.2 KiB, 8901.4 KiB installed
Description
MACS (Model-based Analysis of ChIP-Seq) is a tool for identifying transcription factor (TF) binding sites. Such sites are generated by CHiP-Seq (CHromatin immuno-Precipitation sequencing) and ATAC-Seq (Assay for Transposase Accessible Chromatin Sequencing). MACS identifies "peaks" in the genome sequence, which are areas enriched in bound TFs or accessible chromatin.
In the other systems
The newest version among them is 3.0.5, as upstream numbers it.
| System | Port | Version | Vulnerabilities | Status | Maintainer | Last update |
|---|---|---|---|---|---|---|
| DragonFly | biology/py-macs3 | 3.0.3 behind since 2026-09-26 | none known | - | [email protected] | - |
| FreeBSD | biology/py-macs3 | 3.0.5 newest | none known | - | [email protected] | 2026-10-08 |
| NetBSD | biology/py-macs3 | 3.0.2nb2 behind since 2026-09-26 | none known | - | [email protected] | 2026-10-16 |
| HardenedBSD | biology/py-macs3 | 3.0.5 newest | no data | - | [email protected] | - |
| GhostBSD | biology/py-macs3 | 3.0.4_1 behind since 2026-09-26 | no data | - | [email protected] | - |
Install
Binary package:
pkg install py311-MACS3From DPorts:
cd /usr/dports/biology/py-macs3 && make install cleanDependency graph
Ports that need it on the left, what it needs to run on the right; at most 8 of each. "Dependencies" below lists them all.
Dependencies
Run dependencies 6
No port depends on this one.