BSD Portsbiology/stacks 2.68 DragonFly
Software pipeline for building loci from short-read sequences
- System
- DragonFly
- Repository
- DPorts
- Maintainer
- [email protected] (as in FreeBSD)
- License
- GPLv2
- Categories
- biology, perl5, python
- Package size
- 1257.4 KiB, 7494.1 KiB installed
Description
Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography.
In the other systems
| System | Port | Version |
|---|---|---|
| DragonFly | biology/stacks | 2.68 |
| FreeBSD | biology/stacks | 2.68 |
| NetBSD | biology/stacks | 2.68 |
| HardenedBSD | biology/stacks | 2.68 |
| GhostBSD | biology/stacks | 2.68 |
Install
Binary package:
pkg install stacksFrom DPorts:
cd /usr/dports/biology/stacks && make install cleanDependencies
Run dependencies 1
No port depends on this one.