BSD Ports

science/py-ruffus 2.8.4_1 DragonFly

Lightweight library for computational pipelines

System
DragonFly
Repository
DPorts
Maintainer
[email protected] (as in FreeBSD)
License
MIT
Categories
python, science
Package size
388.9 KiB, 3459.7 KiB installed

Description

The Ruffus module is a lightweight way to add support for running computational pipelines.

Computational pipelines are often conceptually quite simple, especially if we breakdown the process into simple stages, or separate tasks.

Each stage or task in a computational pipeline is represented by a Python function. Each Python function can be called in parallel to run multiple jobs.

Ruffus was originally designed for use in bioinformatics to analyse multiple genome data sets.

In the other systems

SystemPortVersion
DragonFlyscience/py-ruffus2.8.4_1
FreeBSDscience/py-ruffus2.8.4_1
HardenedBSDscience/py-ruffus2.8.4_1
GhostBSDscience/py-ruffus2.8.4_1

Install

Binary package:

pkg install py311-ruffus

From DPorts:

cd /usr/dports/science/py-ruffus && make install clean

Dependencies

Run dependencies 2

No port depends on this one.