BSD Portsgraphics/mirtk 2.0.0.179_2 FreeBSD
Medical Image Registration ToolKit (MIRTK)
- System
- FreeBSD
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- Last update
- Commit
46451ea56c- License
- APACHE20
- Categories
- graphics
- Package size
- 4135.7 KiB, 35320.7 KiB installed
Description
The MIRTK is a research-focused image processing toolkit, developed at the BioMedIA research group. It provides a collection of libraries and command-line tools to assist in processing and analyzing imaging data. The main application of the MIRTK is in adult and neonatal brain MR image registration as well as the reconstruction of cortical surface meshes. The modular project organization of the MIRTK enables the installation of selected modules.
In the other systems
| System | Port | Version |
|---|---|---|
| FreeBSD | graphics/mirtk | 2.0.0.179_2 |
| DragonFly | graphics/mirtk | 2.0.0.178_12 |
Install
Binary package:
pkg install mirtkFrom the ports tree:
cd /usr/ports/graphics/mirtk/ && make install cleanTo depend on this port in another port's Makefile:
RUN_DEPENDS= mirtk>0:graphics/mirtkPackages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | 2.0.0.179_2 | 2.0.0.179_2 | - | - | 2.0.0.179_2 |
| FreeBSD:14:quarterly | 2.0.0.179_2 | 2.0.0.179_2 | n/a | 2.0.0.179_1 | 2.0.0.179_2 |
| FreeBSD:15:latest | 2.0.0.179_2 | 2.0.0.179_2 | n/a | - | 2.0.0.179_1 |
| FreeBSD:15:quarterly | 2.0.0.179_2 | 2.0.0.179_2 | n/a | n/a | n/a |
| FreeBSD:16:latest | 2.0.0.179_2 | 2.0.0.179_2 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
As this port's Makefile names them.
Build 2
boost-libs>0: devel/boost-libsnifticlib>0: science/nifticlib
Library 1
libpng16.so: graphics/png
The full lists below include those, and their dependencies in turn.
Build dependencies 36
- archivers/liblz4
- archivers/zstd
- devel/binutils
- devel/boost-libs
- devel/cmake-core
- devel/gettext-runtime
- devel/hwloc2
- devel/icu
- devel/jsoncpp
- devel/level-zero
- devel/libffi
- devel/libpciaccess
- devel/libunistring
- devel/libuv
- devel/ninja
- devel/onetbb
- devel/readline
- dns/libidn2
- graphics/png
- lang/gcc14
- lang/perl5.42
- lang/python312
- math/blas
- math/eigen3
- math/gmp
- math/lapack
- math/mpc
- math/mpdecimal
- math/mpfr
- misc/hwdata
- ports-mgmt/pkg
- print/indexinfo
- science/nifticlib
- security/rhash
- textproc/expat2
- textproc/libxml2
Run dependencies 15
No port depends on this one.
Configuration
Options name: graphics_mirtk
| Option | Default | Description |
|---|---|---|
| TBB | on | Build with TBB |
| VTK | off | Build with the VTK toolkit |
- USES
- cmake compiler:c++11-lang eigen:3 perl5 python
- Service scripts
- none
Files
pkg-plist 534
- bin/mirtk
- include/mirtk/AdaptiveLineSearch.h
- include/mirtk/AffineTransformation.h
- include/mirtk/Algorithm.h
- include/mirtk/Allocate.h
- include/mirtk/Arith.h
- include/mirtk/Arpack.h
- include/mirtk/Array.h
- include/mirtk/ArrayHeap.h
- include/mirtk/Assert.h
- include/mirtk/BSpline.h
- include/mirtk/BSplineFreeFormTransformation3D.h
- include/mirtk/BSplineFreeFormTransformation4D.h
- include/mirtk/BSplineFreeFormTransformationSV.h
- include/mirtk/BSplineFreeFormTransformationStatistical.h
- include/mirtk/BSplineFreeFormTransformationTD.h
- include/mirtk/BSplineInterpolateImageFunction.h
- include/mirtk/BSplineInterpolateImageFunction.hxx
- include/mirtk/BSplineInterpolateImageFunction2D.h
- include/mirtk/BSplineInterpolateImageFunction2D.hxx
- include/mirtk/BSplineInterpolateImageFunction3D.h
- include/mirtk/BSplineInterpolateImageFunction3D.hxx
- include/mirtk/BSplineInterpolateImageFunction4D.h
- include/mirtk/BSplineInterpolateImageFunction4D.hxx
- include/mirtk/BaseImage.h
- include/mirtk/BinaryVoxelFunction.h
- include/mirtk/BrentLineSearch.h
- include/mirtk/CSplineInterpolateImageFunction.h
- include/mirtk/CSplineInterpolateImageFunction.hxx
- include/mirtk/CSplineInterpolateImageFunction2D.h
- include/mirtk/CSplineInterpolateImageFunction2D.hxx
- include/mirtk/CSplineInterpolateImageFunction3D.h
- include/mirtk/CSplineInterpolateImageFunction3D.hxx
- include/mirtk/CSplineInterpolateImageFunction4D.h
- include/mirtk/CSplineInterpolateImageFunction4D.hxx
- include/mirtk/Cfstream.h
- include/mirtk/CharbonnierErrorFunction.h
- include/mirtk/Cifstream.h
- include/mirtk/CityBlockDistanceTransform.h
- include/mirtk/Closing.h
- include/mirtk/Cofstream.h
- include/mirtk/Common.h
- include/mirtk/CommonConfig.h
- include/mirtk/CommonExport.h
- include/mirtk/Config.h
- include/mirtk/Configurable.h
- include/mirtk/ConjugateGradientDescent.h
- include/mirtk/ConnectedComponents.h
- include/mirtk/ConstExtrapolateImageFunction.h
- include/mirtk/ConstExtrapolateImageFunctionWithPeriodicTime.h
- include/mirtk/ConstGenericImageIterator.h
- include/mirtk/ConstImageIterator.h
- include/mirtk/ConstraintMeasure.h
- include/mirtk/ConvolutionFunction.h
- include/mirtk/CosineOfNormalizedGradientField.h
- include/mirtk/CubicBSplineConvolution.h
- include/mirtk/CubicBSplineInterpolateImageFunction.h
- include/mirtk/CubicBSplineInterpolateImageFunction.hxx
- include/mirtk/CubicBSplineInterpolateImageFunction2D.h
- include/mirtk/CubicBSplineInterpolateImageFunction2D.hxx
- include/mirtk/CubicBSplineInterpolateImageFunction3D.h
- include/mirtk/CubicBSplineInterpolateImageFunction3D.hxx
- include/mirtk/CubicBSplineInterpolateImageFunction4D.h
- include/mirtk/CubicBSplineInterpolateImageFunction4D.hxx
- include/mirtk/Cuda.h
- include/mirtk/CudaRuntime.h
- include/mirtk/CurrentsDistance.h
- include/mirtk/CutilMath.h
- include/mirtk/DataFidelity.h
- include/mirtk/DataFunctions.h
- include/mirtk/DataOp.h
- include/mirtk/DataSelection.h
- include/mirtk/DataStatistics.h
- include/mirtk/Deallocate.h
- include/mirtk/DifferenceOfCompositionLieBracketImageFilter3D.h
- include/mirtk/Dilation.h
- include/mirtk/DisplacementFieldExp.h
- include/mirtk/DisplacementToVelocityField.h
- include/mirtk/DisplacementToVelocityFieldBCH.h
- include/mirtk/DistanceErrorFunction.h
- include/mirtk/Downsampling.h
- include/mirtk/Eigen.h
- include/mirtk/EnergyMeasure.h
- include/mirtk/EnergyTerm.h
- include/mirtk/EnergyThreshold.h
- include/mirtk/Erosion.h
- include/mirtk/EuclideanDistanceTransform.h
- include/mirtk/Event.h
- include/mirtk/EventDelegate.h
- include/mirtk/Exception.h
- include/mirtk/ExtrapolateImageFunction.h
- include/mirtk/ExtrapolationMode.h
- include/mirtk/FFDIntegrationMethod.h
- include/mirtk/FastCubicBSplineInterpolateImageFunction.h
- include/mirtk/FastCubicBSplineInterpolateImageFunction.hxx
- include/mirtk/FastCubicBSplineInterpolateImageFunction2D.h
- include/mirtk/FastCubicBSplineInterpolateImageFunction2D.hxx
- include/mirtk/FastCubicBSplineInterpolateImageFunction3D.h
- include/mirtk/FastCubicBSplineInterpolateImageFunction3D.hxx
- include/mirtk/FastCubicBSplineInterpolateImageFunction4D.h
The first 100 are listed.
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| BioMedIA-MIRTK-v2.0.0-179-gef71a17_GH0.tar.gz | 2.905635e+06 | 7f95229472dda2979bcefbb80a37942817f28a845eb10fa75462405ff02df2dd |