BSD Portsbiology/ad2vcf 0.1.6.20 NetBSD
Add allelic depth info from a SAM stream to a VCF file
- System
- NetBSD
- Repository
- pkgsrc
- Maintainer
- [email protected]
- License
- 2-clause-bsd
- Categories
- biology
- Package size
- 11.4 KiB, 28.7 KiB installed
Description
ad2vdf extracts allelic depth info from a SAM stream and adds it to a corresponding single-sample VCF file.
In the other systems
The newest version among them is 0.1.6.20, as upstream numbers it.
| System | Port | Version | Vulnerabilities | Status | Maintainer | Last update |
|---|---|---|---|---|---|---|
| NetBSD | biology/ad2vcf | 0.1.6.20 newest | none known | - | [email protected] | - |
| FreeBSD | biology/ad2vcf | 0.1.6.19 | none known | - | [email protected] | - |
| DragonFly | biology/ad2vcf | 0.1.6.19 | none known | - | [email protected] | - |
| HardenedBSD | biology/ad2vcf | 0.1.6.19 | no data | - | [email protected] | - |
| GhostBSD | biology/ad2vcf | 0.1.6.19 | no data | - | [email protected] | - |
Install
Binary package:
pkgin install ad2vcfFrom pkgsrc:
cd /usr/pkgsrc/biology/ad2vcf && make install cleanPackages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | Version |
|---|---|
| NetBSD 10.1 x86_64 | 0.1.6.20 |
| NetBSD 10.1 aarch64 | 0.1.6.20 |
| SmartOS / illumos x86_64 | 0.1.6.20 |
| macOS 15 arm64 | 0.1.6.20 |
Dependency graph
Ports that need it on the left, what it needs to run on the right; at most 8 of each. "Dependencies" below lists them all.
Dependencies
Run dependencies 1
No port depends on this one.