BSD Portsbiology/py-bcbio-gff 0.7.1 NetBSD
Read and write Generic Feature Format (GFF) with Biopython integration
- System
- NetBSD
- Repository
- pkgsrc
- Maintainer
- [email protected]
- License
- modified-bsd
- Categories
- biology
- Package size
- 36.9 KiB, 181.6 KiB installed
Description
Read and write Generic Feature Format (GFF) with Biopython integration.
* Eventually to be integrated into gffutils, making bcbio-gff ibsolete.
Generic Feature Format (GFF) is a biological sequence file format for representing features and annotations on sequences. It is a tab delimited format, making it accessible to biologists and editable in text editors and spreadsheet programs. It is also well defined and can be parsed via automated programs. GFF files are available from many of the large sequencing and annotation centers.
In the other systems
The newest version among them is 0.7.1, as upstream numbers it.
| System | Port | Version | Vulnerabilities | Status | Maintainer | Last update |
|---|---|---|---|---|---|---|
| NetBSD | biology/py-bcbio-gff | 0.7.1 newest | none known | - | [email protected] | - |
| FreeBSD | biology/py-bcbio-gff | 0.7.1_1 newest | none known | - | [email protected] | 2026-10-08 |
| DragonFly | biology/py-bcbio-gff | 0.7.1_1 newest | none known | - | [email protected] | - |
| HardenedBSD | biology/py-bcbio-gff | 0.7.1_1 newest | no data | - | [email protected] | - |
| GhostBSD | biology/py-bcbio-gff | 0.7.1_1 newest | no data | - | [email protected] | - |
Install
Binary package:
pkgin install py311-bcbio-gffFrom pkgsrc:
cd /usr/pkgsrc/biology/py-bcbio-gff && make install cleanPackages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | Version |
|---|---|
| NetBSD 10.1 x86_64 | 0.7.1 |
| NetBSD 10.1 aarch64 | 0.7.1 |
| SmartOS / illumos x86_64 | 0.7.1 |
| macOS 15 arm64 | 0.7.1 |
Dependency graph
Ports that need it on the left, what it needs to run on the right; at most 8 of each. "Dependencies" below lists them all.
Dependencies
Run dependencies 1
Required by 1
Configuration
No options to configure.
- Service scripts
- none
- Flavors
py312-bcbio-gff-0.7.1,py313-bcbio-gff-0.7.1,py314-bcbio-gff-0.7.1