biology/bioperl 1.7.8 OpenBSD

perl tools for bioinformatics

System: OpenBSD
Repository: OpenBSD ports
Maintainer: The OpenBSD ports mailing-list <[email protected]>
Categories: biology, perl5

Description

BioPerl is a toolkit of perl modules useful in building bioinformatics solutions in Perl.

In the other systems

The newest version among them is 1.7.8, as upstream numbers it.

System

Port

Version

Vulnerabilities

Status

Maintainer

Last update

OpenBSD

biology/bioperl

1.7.8 newest

no data

The OpenBSD ports mailing-list <[email protected]>

NetBSD

biology/bioperl

1.7.7nb7

none known

[email protected]

2026-07-16

Compare across BSDs

Install

Binary package:

pkg_add bioperl

From the ports tree:

cd /usr/ports/biology/bioperl && make install

Dependency graph

Ports that need it on the left, what it needs to run on the right; at most 8 of each. "Dependencies" below lists them all.

graph LR
  me["biology/bioperl"]
  u0["biology/p5-Bio-ASN1-EntrezGene"] --> me
  u1["biology/p5-Bio-DB-EMBL"] --> me
  u2["biology/p5-Bio-DB-NCBIHelper"] --> me
  u3["biology/p5-Bio-Variation"] --> me
  me --> d0["devel/p5-Data-Stag"]
  me --> d1["devel/p5-Error"]
  me --> d2["devel/p5-Graph"]
  me --> d3["devel/p5-IO-String"]
  me --> d4["devel/p5-IO-stringy"]
  me --> d5["devel/p5-IPC-Run"]
  me --> d6["devel/p5-List-MoreUtils"]
  me --> d7["devel/p5-Module-Build"]
  me -.-> dmore(["16 more"])
  classDef this fill:#ab2b28,color:#ffffff,stroke:#ab2b28
  class me this