BSD Ports

science/afni 26.3.04 FreeBSD

Advanced Functional Neuro Imaging

System
FreeBSD
Repository
FreeBSD ports
Maintainer
[email protected]
Last update
Commit
c07e979c01
License
GPLv2
Categories
science, biology, graphics, perl5, python

Description

AFNI (Analysis of Functional Neuro Imaging) is a tool for analyzing 3-dimensional images, especially functional MRI images used in brain mapping research.

In the other systems

SystemPortVersion
FreeBSDscience/afni26.3.04
DragonFlyscience/afni25.0.13

Install

Binary package:

pkg install afni

From the ports tree:

cd /usr/ports/science/afni/ && make install clean

To depend on this port in another port's Makefile:

RUN_DEPENDS=	afni>0:science/afni

Packages

The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.

Repositoryaarch64amd64armv6armv7i386
FreeBSD:14:latest-26.3.02--26.3.04
FreeBSD:14:quarterly-26.2.09n/a-26.2.09
FreeBSD:15:latest-26.3.04n/a--
FreeBSD:15:quarterly-26.2.09n/an/an/a
FreeBSD:16:latest-26.3.04n/an/an/a
FreeBSD:16:quarterlyn/an/an/an/an/a

Dependencies

As this port's Makefile names them.

Build 5

Library 11

Runtime 7

The full lists below include those, and their dependencies in turn.

Build dependencies 121

The first 100 are listed.

Run dependencies 148

The first 100 are listed.

No port depends on this one.

Configuration

Options name: science_afni

OptionDefaultDescription
DOCSoffBuild and/or install documentation
USES
gettext gl gmake gnome iconv jpeg:run motif readline perl5 python shebangfix tar:xz xorg
Service scripts
none
Conflicts with
im open-usp-tukubai

Files

pkg-plist 2093
  • bin/1dApar2mat
  • bin/1dAstrip
  • bin/1dBandpass
  • bin/1dBport
  • bin/1dCorrelate
  • bin/1dDW_Grad_o_Mat++
  • bin/1dFlagMotion
  • bin/1dGC.R
  • bin/1dMarry
  • bin/1dNLfit
  • bin/1dRplot
  • bin/1dRplot.R
  • bin/1dSEM
  • bin/1dSEMr.R
  • bin/1dSVAR.R
  • bin/1dTrdm
  • bin/1dTsort
  • bin/1dUpsample
  • bin/1d_tool.py
  • bin/1dcat
  • bin/1ddot
  • bin/1deval
  • bin/1dfft
  • bin/1dgenARMA11
  • bin/1dgrayplot
  • bin/1dmatcalc
  • bin/1dnorm
  • bin/1dplot
  • bin/1dplot.py
  • bin/1dsound
  • bin/1dsum
  • bin/1dsvd
  • bin/1dtranspose
  • bin/24swap
  • bin/2dImReg
  • bin/2dcat
  • bin/2perm
  • bin/2swap
  • bin/3dABoverlap
  • bin/3dAFNIto3D
  • bin/3dAFNItoANALYZE
  • bin/3dAFNItoNIFTI
  • bin/3dAFNItoNIML
  • bin/3dAFNItoRaw
  • bin/3dANOVA
  • bin/3dANOVA2
  • bin/3dANOVA3
  • bin/3dAcost
  • bin/3dAllineate
  • bin/3dAmpToRSFC
  • bin/3dAnhist
  • bin/3dAttribute
  • bin/3dAutoTcorrelate
  • bin/3dAutobox
  • bin/3dAutomask
  • bin/3dBRAIN_VOYAGERtoAFNI
  • bin/3dBallMatch
  • bin/3dBandpass
  • bin/3dBlurInMask
  • bin/3dBlurToFWHM
  • bin/3dBrainSync
  • bin/3dBrickStat
  • bin/3dCM
  • bin/3dCRUISEtoAFNI
  • bin/3dClipLevel
  • bin/3dClustCount
  • bin/3dClustSim
  • bin/3dClusterize
  • bin/3dCompareAffine
  • bin/3dConformist
  • bin/3dConvolve
  • bin/3dDFT
  • bin/3dDTeig
  • bin/3dDTtoDWI
  • bin/3dDTtoNoisyDWI
  • bin/3dDWItoDT
  • bin/3dDWUncert
  • bin/3dDeconvolve
  • bin/3dDegreeCentrality
  • bin/3dDepthMap
  • bin/3dDespike
  • bin/3dDetrend
  • bin/3dDiff
  • bin/3dECM
  • bin/3dEdu_01_scale
  • bin/3dEigsToDT
  • bin/3dEmpty
  • bin/3dEntropy
  • bin/3dErrtsCormat
  • bin/3dExchange
  • bin/3dExtractGroupInCorr
  • bin/3dExtrema
  • bin/3dFDR
  • bin/3dFFT
  • bin/3dFWHMx
  • bin/3dFriedman
  • bin/3dGC.R
  • bin/3dGLMM
  • bin/3dGLMM.R
  • bin/3dGenFeatureDist

The first 100 are listed.

distinfo 1
FileSizeSHA256
afni-afni-AFNI_26.3.04_GH0.tar.gz5.4377203e+07feaae9b2800eac8af7db29caf5a8e8c7327abc09c0bacc70552f06e71d466bae

Commit history 13

DateCommitCreditsLog message
c07e979c01 Fernando Apesteguía science/afni: Update to 26.3.04
035eb0b746 Fernando Apesteguía science/afni: Update to 26.3.02
8f0ede8d87 Fernando Apesteguía science/afni: Update to 26.3.01
14a36e1230 Fernando Apesteguía science/afni: Update to 26.2.09
ccf812cd75 Fernando Apesteguía science/afni: Update to 26.2.08

The latest 5 of 13 in the history this site was built from.