science/cardioid g20211026_5 FreeBSD
Cardiac simulation toolkit
- System
- FreeBSD
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- Last update
- Commit
0b23c55e5d- License
- MIT
- Categories
- science
- Package size
- 340.7 KiB, 951.0 KiB installed
Description
Cardioid is a cardiac multiscale simulation suite spanning from subcellular mechanisms up to simulations of organ-level clinical phenomena. The suite contains tools for simulating cardiac electrophysiology, cardiac mechanics, torso-ECGs, cardiac meshing and fiber generation tools.
Install
Binary package:
pkg install cardioidFrom the ports tree:
cd /usr/ports/science/cardioid/ && make install cleanTo depend on this port in another port's Makefile:
RUN_DEPENDS= cardioid>0:science/cardioidPackages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | g20211026_5 | g20211026_5 | - | g20211026_4 | g20211026_5 |
| FreeBSD:14:quarterly | g20211026_5 | g20211026_5 | n/a | g20211026_4 | g20211026_5 |
| FreeBSD:15:latest | g20211026_5 | g20211026_5 | n/a | g20211026_4 | g20211026_4 |
| FreeBSD:15:quarterly | g20211026_5 | g20211026_5 | n/a | n/a | n/a |
| FreeBSD:16:latest | g20211026_5 | g20211026_5 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
As this port's Makefile names them.
Library 2
libblas.so: math/blasliblapack.so: math/lapack
Runtime 1
bash: shells/bash
The full lists below include those, and their dependencies in turn.
Build dependencies 34
- archivers/liblz4
- archivers/zstd
- devel/binutils
- devel/cmake-core
- devel/gettext-runtime
- devel/hwloc2
- devel/json-c
- devel/jsoncpp
- devel/level-zero
- devel/libepoll-shim
- devel/libffi
- devel/libpciaccess
- devel/libunistring
- devel/libuv
- devel/ninja
- devel/readline
- dns/libidn2
- lang/gcc14
- lang/perl5.42
- lang/python312
- math/blas
- math/gmp
- math/lapack
- math/mpc
- math/mpdecimal
- math/mpfr
- misc/hwdata
- net/libfabric
- net/mpich
- ports-mgmt/pkg
- print/indexinfo
- security/rhash
- textproc/expat2
- textproc/libxml2
Run dependencies 23
No port depends on this one.
Configuration
Options name: science_cardioid
| Option | Default | Description |
|---|---|---|
| MFEM | off | Build with MFEM mesh library |
| MPICH | on | Parallel processing support via MPICH |
| NOMPI | off | Build without parallel processing support |
| OPENMP | on | Parallel processing support via OpenMP |
| OPENMPI | off | Parallel processing support via Open MPI |
- USES
- cmake:testing shebangfix
- Service scripts
- none
Files
distinfo 2
| File | Size | SHA256 |
|---|---|---|
| LLNL-cardioid-g20211026-2f66d9f_GH0.tar.gz | 6.781832e+06 | 16bfedb27110170adcf8f3090379a56c8e1637256e2761e85d98c9c043dcf970 |
| mfem-mfem-v4.4_GH0.tar.gz | 3.078651e+06 | 0325a57854d9268dfe3f8d9b03836eb01b00a966d93162e6249857e9fab9c61f |