science/nest 3.10_1 FreeBSD
Simulator for spiking neural network models
- System
- FreeBSD
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- Last update
- Commit
97a84ef467- License
- GPLv2
- Categories
- science, biology
- Package size
- 16528.8 KiB, 49309.6 KiB installed
Description
NEST is a simulator for spiking neural network models that focuses on the dynamics, size and structure of neural systems rather than on the exact morphology of individual neurons. The development of NEST is coordinated by the NEST Initiative.
NEST is ideal for networks of spiking neurons of any size, for example: * Models of information processing e.g. in the visual or auditory cortex of mammals, * Models of network activity dynamics, e.g. laminar cortical networks or balanced random networks, * Models of learning and plasticity.
In the other systems
| System | Port | Version |
|---|---|---|
| FreeBSD | science/nest | 3.10_1 |
| DragonFly | science/nest | 3.8_3 |
Install
Binary package:
pkg install nestFrom the ports tree:
cd /usr/ports/science/nest/ && make install cleanTo depend on this port in another port's Makefile:
RUN_DEPENDS= nest>0:science/nestPackages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | 3.10_1 | 3.10_1 | - | - | - |
| FreeBSD:14:quarterly | 3.10_1 | 3.10_1 | n/a | - | - |
| FreeBSD:15:latest | 3.10_1 | 3.10_1 | n/a | - | - |
| FreeBSD:15:quarterly | 3.10_1 | 3.10_1 | n/a | n/a | n/a |
| FreeBSD:16:latest | 3.10_1 | 3.10_1 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
As this port's Makefile names them.
Library 3
libboost_thread.so: devel/boost-libslibgsl.so: math/gsllibltdl.so: devel/libltdl
Runtime 1
bash: shells/bash
The full lists below include those, and their dependencies in turn.
Build dependencies 24
- archivers/liblz4
- archivers/zstd
- devel/boost-libs
- devel/cmake-core
- devel/gettext-runtime
- devel/icu
- devel/jsoncpp
- devel/libffi
- devel/libltdl
- devel/libunistring
- devel/libuv
- devel/ninja
- devel/pkgconf
- devel/readline
- dns/libidn2
- lang/cython
- lang/python312
- lang/python315
- math/gsl
- math/mpdecimal
- ports-mgmt/pkg
- print/indexinfo
- security/rhash
- textproc/expat2
Run dependencies 14
No port depends on this one.
Configuration
Options name: science_nest
| Option | Default | Description |
|---|---|---|
| DOCS | off | Build and/or install documentation |
| PYTHON | on | Python bindings or support |
- USES
- cmake:testing ncurses pkgconfig python readline shebangfix
- Service scripts
- none
Files
pkg-plist 811
- bin/nest-config
- bin/nest-server
- bin/nest-server-mpi
- bin/run_all_cpptests
- include/nest/Random123/aes.h
- include/nest/Random123/array.h
- include/nest/Random123/ars.h
- include/nest/Random123/conventional/gsl_cbrng.h
- include/nest/Random123/features/clangfeatures.h
- include/nest/Random123/features/compilerfeatures.h
- include/nest/Random123/features/gccfeatures.h
- include/nest/Random123/features/iccfeatures.h
- include/nest/Random123/features/metalfeatures.h
- include/nest/Random123/features/msvcfeatures.h
- include/nest/Random123/features/nvccfeatures.h
- include/nest/Random123/features/open64features.h
- include/nest/Random123/features/openclfeatures.h
- include/nest/Random123/features/pgccfeatures.h
- include/nest/Random123/features/sse.h
- include/nest/Random123/features/sunprofeatures.h
- include/nest/Random123/features/xlcfeatures.h
- include/nest/Random123/gsl_microrng.h
- include/nest/Random123/philox.h
- include/nest/Random123/tests/kat.h
- include/nest/Random123/tests/kat_main.h
- include/nest/Random123/tests/rngNxW.h
- include/nest/Random123/tests/util.h
- include/nest/Random123/threefry.h
- include/nest/Random123/u01fixedpt.h
- include/nest/ac_generator.h
- include/nest/aeif_cond_alpha.h
- include/nest/aeif_cond_alpha_astro.h
- include/nest/aeif_cond_alpha_multisynapse.h
- include/nest/aeif_cond_beta_multisynapse.h
- include/nest/aeif_cond_exp.h
- include/nest/aeif_psc_alpha.h
- include/nest/aeif_psc_delta.h
- include/nest/aeif_psc_delta_clopath.h
- include/nest/aeif_psc_exp.h
- include/nest/amat2_psc_exp.h
- include/nest/archiving_node.h
- include/nest/astrocyte_lr_1994.h
- include/nest/bernoulli_synapse.h
- include/nest/beta_normalization_factor.h
- include/nest/binary_neuron.h
- include/nest/block_vector.h
- include/nest/buffer_resize_log.h
- include/nest/clopath_archiving_node.h
- include/nest/clopath_synapse.h
- include/nest/cm_compartmentcurrents.h
- include/nest/cm_default.h
- include/nest/cm_tree.h
- include/nest/common_properties_hom_w.h
- include/nest/common_synapse_properties.h
- include/nest/compose.hpp
- include/nest/config.h
- include/nest/conn_builder.h
- include/nest/conn_builder_conngen.h
- include/nest/conn_builder_factory.h
- include/nest/conn_builder_impl.h
- include/nest/conn_parameter.h
- include/nest/connection.h
- include/nest/connection_creator.h
- include/nest/connection_creator_impl.h
- include/nest/connection_id.h
- include/nest/connection_label.h
- include/nest/connection_manager.h
- include/nest/connection_manager_impl.h
- include/nest/connector_base.h
- include/nest/connector_base_impl.h
- include/nest/connector_model.h
- include/nest/connector_model_impl.h
- include/nest/cont_delay_synapse.h
- include/nest/cont_delay_synapse_impl.h
- include/nest/correlation_detector.h
- include/nest/correlomatrix_detector.h
- include/nest/correlospinmatrix_detector.h
- include/nest/cycle_time_log.h
- include/nest/dc_generator.h
- include/nest/delay_checker.h
- include/nest/deprecation_warning.h
- include/nest/device.h
- include/nest/device_node.h
- include/nest/dict_util.h
- include/nest/dictionary.h
- include/nest/diffusion_connection.h
- include/nest/enum_bitfield.h
- include/nest/eprop_archiving_node.h
- include/nest/eprop_archiving_node_impl.h
- include/nest/eprop_archiving_node_readout.h
- include/nest/eprop_archiving_node_recurrent.h
- include/nest/eprop_archiving_node_recurrent_impl.h
- include/nest/eprop_iaf.h
- include/nest/eprop_iaf_adapt.h
- include/nest/eprop_iaf_adapt_bsshslm_2020.h
- include/nest/eprop_iaf_bsshslm_2020.h
- include/nest/eprop_iaf_psc_delta.h
- include/nest/eprop_iaf_psc_delta_adapt.h
- include/nest/eprop_learning_signal_connection.h
- include/nest/eprop_learning_signal_connection_bsshslm_2020.h
The first 100 are listed.
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| nest-nest-simulator-v3.10_GH0.tar.gz | 3.6287666e+07 | fd4def89c109e19d50e4630ab56bb9ddd4f15bf0ef735070189f0a83e2416a55 |