science/py-chainer-chemistry 0.7.1_5 FreeBSD
Library for deep learning in biology and chemistry
- System
- FreeBSD
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- License
- MIT
- Categories
- science, biology
Description
Chainer Chemistry is a deep learning framework (based on Chainer) with applications in Biology and Chemistry. It supports various state-of-the-art models (especially GCNN - Graph Convolutional Neural Network) for chemical property prediction.
In the other systems
The newest version among them is 0.7.1, as upstream numbers it.
| System | Port | Version | Vulnerabilities | Status | Maintainer | Last update |
|---|---|---|---|---|---|---|
| FreeBSD | science/py-chainer-chemistry | 0.7.1_5 newest | none known | - | [email protected] | - |
| DragonFly | science/py-chainer-chemistry | 0.7.1_2 newest | none known | - | [email protected] | - |
| HardenedBSD | science/py-chainer-chemistry | 0.7.1_5 newest | no data | - | [email protected] | - |
| GhostBSD | science/py-chainer-chemistry | 0.7.1_5 newest | no data | - | [email protected] | - |
Install
Binary package:
pkg install py312-chainer-chemistry
From the ports tree:
cd /usr/ports/science/py-chainer-chemistry/ && make install clean
To depend on this port in another port's Makefile:
RUN_DEPENDS= py312-chainer-chemistry>0:science/py-chainer-chemistry
Packages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | - | 0.7.1_5 | - | 0.7.1_2 | 0.7.1_5 |
| FreeBSD:14:quarterly | - | 0.7.1_5 | n/a | 0.7.1_2 | 0.7.1_5 |
| FreeBSD:15:latest | - | 0.7.1_5 | n/a | 0.7.1_2 | 0.7.1_2 |
| FreeBSD:15:quarterly | - | 0.7.1_5 | n/a | n/a | n/a |
| FreeBSD:16:latest | - | 0.7.1_5 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependency graph
Ports that need it on the left, what it needs to run on the right; at most 8 of each. "Dependencies" below lists them all.
Dependencies
As this port's Makefile names them.
Runtime 8
${PYTHON_PKGNAMEPREFIX}numpy>=1.16: math/py-numpy${PYTHON_PKGNAMEPREFIX}chainer>=7.0.0: science/py-chainer${PYTHON_PKGNAMEPREFIX}joblib>0: devel/py-joblib${PYTHON_PKGNAMEPREFIX}matplotlib>0: math/py-matplotlib${PYTHON_PKGNAMEPREFIX}pandas>0: math/py-pandas${PYTHON_PKGNAMEPREFIX}scipy>0: science/py-scipy${PYTHON_PKGNAMEPREFIX}scikit-learn>0: science/py-scikit-learn${PYTHON_PKGNAMEPREFIX}tqdm>0: misc/py-tqdm
The full lists below include those, and their dependencies in turn.
Build dependencies 11
Run dependencies 102
- archivers/brotli
- archivers/libdeflate
- archivers/liblz4
- archivers/py-brotli
- archivers/py-zopfli
- archivers/zopfli
- archivers/zstd
- converters/fribidi
- converters/libiconv
- databases/py-sqlite3
- databases/sqlite3
- devel/abseil
- devel/binutils
- devel/gettext-runtime
- devel/glib20
- devel/jsoncpp
- devel/libedit
- devel/libffi
- devel/libinotify
- devel/pcre2
- devel/protobuf
- devel/py-cloudpickle
- devel/py-cycler
- devel/py-joblib
- devel/py-lxml
- devel/py-olefile
- devel/py-packaging
- devel/py-protobuf
- devel/py-pyparsing
- devel/py-python-dateutil
- devel/py-pytz
- devel/py-six
- devel/py-threadpoolctl
- devel/py-typing-extensions
- devel/py-tzdata
- devel/py-unicodedata2
- devel/readline
- graphics/gdk-pixbuf2
- graphics/giflib
- graphics/graphite2
- graphics/jbigkit
- graphics/jpeg-turbo
- graphics/lcms2
- graphics/lerc
- graphics/libavif
- graphics/libimagequant
- graphics/libyuv
- graphics/openjpeg
- graphics/png
- graphics/py-pillow
- graphics/tiff
- graphics/webp
- lang/gcc14
- lang/python312
- lang/python315
- lang/tcl86
- math/gmp
- math/libtommath
- math/mpc
- math/mpdecimal
- math/mpfr
- math/openblas
- math/py-bottleneck
- math/py-contourpy
- math/py-kiwisolver
- math/py-matplotlib
- math/py-narwhals
- math/py-numexpr
- math/py-numpy
- math/py-pandas
- math/qhull
- misc/py-tqdm
- misc/shared-mime-info
- multimedia/aom
- multimedia/dav1d
- multimedia/vmaf
- print/freetype2
- print/harfbuzz
- print/indexinfo
- print/libraqm
- print/py-fonttools
- science/py-chainer
- science/py-scikit-learn
- science/py-scipy
- security/libgcrypt
- security/libgpg-error
- sysutils/py-filelock
- textproc/expat2
- textproc/libxml2
- textproc/libxslt
- x11-fonts/fontconfig
- x11-fonts/libXft
- x11-toolkits/py-tkinter
- x11-toolkits/tk86
- x11/libX11
- x11/libXScrnSaver
- x11/libXau
- x11/libXdmcp
- x11/libXext
- x11/libXrender
The first 100 are listed.
No port depends on this one.
Configuration
No options to configure.
- USES
- python
- Service scripts
- none
Files
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| chainer-chemistry-0.7.1.tar.gz | 119460 | 6626f24c4324227e7912fbaab4c65a79db7163c65ddf64caf06df6650442b681 |
Master sites 1
- PYPI
Commit history 0
No commits in the history this site was built from.