science/py-gsd 5.0.1 FreeBSD
GSD (General Simulation Data) file format for Python
- System
- FreeBSD
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- Last update
- Commit
012848c144- License
- BSD2CLAUSE
- Categories
- science, python
- Package size
- 257.9 KiB, 2008.8 KiB installed
Description
A library to read and write GSD (General Simulation Data) file format.
The package also contains a python module that reads and writes hoomd schema gsd files with an easy to use syntax.
Features: * Efficiently store many frames of data from simulation runs. * High performance file read and write. * Support arbitrary chunks of data in each frame (position, orientation, type, etc...). * Append frames to an existing file with a monotonically increasing frame number. * Resilient to job kills. * Variable number of named chunks in each frame. * Variable size of chunks in each frame. * Each chunk identifies data type. * Common use cases: NxM arrays in double, float, int, char types. * Generic use case: binary blob of N bytes. * Easy to integrate into other tools with python, or a C API (< 1k lines). * Fast random access to frames.
In the other systems
| System | Port | Version |
|---|---|---|
| FreeBSD | science/py-gsd | 5.0.1 |
| DragonFly | science/py-gsd | 3.4.1_1 |
Install
Binary package:
pkg install py312-gsd
From the ports tree:
cd /usr/ports/science/py-gsd/ && make install clean
To depend on this port in another port's Makefile:
RUN_DEPENDS= py312-gsd>0:science/py-gsd
Packages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | 5.0.1 | 5.0.1 | - | 3.4.1_1 | 5.0.1 |
| FreeBSD:14:quarterly | 5.0.1 | 5.0.1 | n/a | 3.4.1_1 | 5.0.1 |
| FreeBSD:15:latest | 5.0.1 | 5.0.1 | n/a | 3.4.1_1 | 3.4.1_1 |
| FreeBSD:15:quarterly | 5.0.1 | 5.0.1 | n/a | n/a | n/a |
| FreeBSD:16:latest | 5.0.1 | 5.0.1 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
As this port's Makefile names them.
Build 2
${PYTHON_PKGNAMEPREFIX}wheel>0: devel/py-wheel${PYTHON_PKGNAMEPREFIX}numpy>=2.0: math/py-numpy
Runtime 1
${PYTHON_PKGNAMEPREFIX}numpy>=1.0: math/py-numpy
The full lists below include those, and their dependencies in turn.
Build dependencies 24
- archivers/liblz4
- archivers/zstd
- devel/binutils
- devel/gettext-runtime
- devel/libffi
- devel/py-build
- devel/py-installer
- devel/py-packaging
- devel/py-pyproject-hooks
- devel/py-setuptools
- devel/py-wheel
- devel/readline
- lang/cython
- lang/gcc14
- lang/python312
- lang/python315
- math/gmp
- math/mpc
- math/mpdecimal
- math/mpfr
- math/openblas
- math/py-numpy
- print/indexinfo
- textproc/expat2
Run dependencies 16
Required by 2
Configuration
No options to configure.
- USES
- python
- Service scripts
- none
Files
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| gsd-5.0.1.tar.gz | 202182 | c072d1ee934864d618039f3e7448bc79f31fe1a0f1fabfdb9cd4143a7ab2376b |
Master sites 1
- PYPI