science/py-morphio 3.4.2
Neuron morphology IO library
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- License
- APACHE20
- Categories
- science, python
- Package size
- 584.9 KiB, 2225.4 KiB installed
Description
MorphIO is a library for reading and writing neuron morphology files. It supports the following formats:
SWC ASC (aka. neurolucida) H5 v1 H5 v2 is not supported anymore, see H5v2
Install
As a binary package — by origin, or by package name:
pkg install science/py-morphio
pkg install py312-morphioFrom the ports tree:
cd /usr/ports/science/py-morphio/ && make install cleanTo depend on this port in another port's Makefile:
RUN_DEPENDS= py312-morphio>0:science/py-morphioPackages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | 3.4.2 | 3.4.2 | - | - | 3.4.2 |
| FreeBSD:14:quarterly | 3.4.2 | 3.4.2 | n/a | - | 3.4.2 |
| FreeBSD:15:latest | 3.4.2 | 3.4.2 | n/a | - | - |
| FreeBSD:15:quarterly | 3.4.2 | 3.4.2 | n/a | n/a | n/a |
| FreeBSD:16:latest | 3.4.2 | 3.4.2 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
As this port's Makefile names them.
Build 6
${PYTHON_PKGNAMEPREFIX}setuptools>=61.0: devel/py-setuptools${PYTHON_PKGNAMEPREFIX}setuptools-scm>0: devel/py-setuptools-scm${PYTHON_PKGNAMEPREFIX}wheel>0: devel/py-wheelcmake: devel/cmake-coreninja: devel/ninjapybind11>0: devel/pybind11
Library 1
libhdf5.so: science/hdf5
The full lists below include those, and their dependencies in turn.
All build dependencies 33
- archivers/liblz4
- archivers/zstd
- devel/binutils
- devel/cmake-core
- devel/gettext-runtime
- devel/jsoncpp
- devel/libffi
- devel/libunistring
- devel/libuv
- devel/ninja
- devel/py-build
- devel/py-installer
- devel/py-packaging
- devel/py-pyproject-hooks
- devel/py-setuptools
- devel/py-setuptools-scm
- devel/py-wheel
- devel/pybind11
- devel/readline
- dns/libidn2
- lang/gcc14
- lang/python312
- lang/python315
- math/gmp
- math/mpc
- math/mpdecimal
- math/mpfr
- ports-mgmt/pkg
- print/indexinfo
- science/hdf5
- science/libaec
- security/rhash
- textproc/expat2
All run dependencies 16
No port depends on this one.
Configuration
No options to configure.
- USES
- python
- Service scripts
- none
Files
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| morphio-3.4.2.tar.gz | 690093 | 4521b01dd8de8ff98b44341318cee44d75552dfd58b95a0e82ebfffe653b88f8 |
Master sites 1
- PYPI
Commit history 0
No commits in the history this site was built from.