science/py-openbabel 3.2.1 FreeBSD
Chemical toolbox designed to speak the many languages of chemical data
- System
- FreeBSD
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- Last update
- Commit
2e51765517- License
- GPLv2+
- Categories
- science
- Package size
- 4946.9 KiB, 31380.8 KiB installed
Description
Open Babel is a project designed to pick up where Babel left off, as a cross-platform program and library designed to interconvert between many file formats used in molecular modeling and computational chemistry.
Features currently include: * A huge variety of common chemical file formats * Recognition of file type based on filename extension * SMARTS matcher * Flexible atom typer * Gasteiger partial charge calculation * Hydrogen addition and deletion * Automatic feature perception (rings, hybridization, aromaticity) * Multiple conformer storage within molecules * Command line interface development class * Bitvector class * Open-source/Free Software under the GNU General Public License * Cross platform (Windows, Linux, Mac OS X, SGI, Solaris, Dreamcast...)
In the other systems
| System | Port | Version |
|---|---|---|
| FreeBSD | science/py-openbabel | 3.2.1 |
| DragonFly | science/py-openbabel | 3.1.1.1_1 |
Install
Binary package:
pkg install py312-openbabel
From the ports tree:
cd /usr/ports/science/py-openbabel/ && make install clean
To depend on this port in another port's Makefile:
RUN_DEPENDS= py312-openbabel>0:science/py-openbabel
Packages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | 3.2.1 | 3.2.1 | - | 3.1.1.1_1 | 3.2.1 |
| FreeBSD:14:quarterly | 3.2.1 | 3.2.1 | n/a | 3.1.1.1_1 | 3.2.1 |
| FreeBSD:15:latest | 3.2.1 | 3.2.1 | n/a | 3.1.1.1_1 | 3.1.1.1_1 |
| FreeBSD:15:quarterly | 3.2.1 | 3.2.1 | n/a | n/a | n/a |
| FreeBSD:16:latest | 3.2.1 | 3.2.1 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
As this port's Makefile names them.
Build 6
swig: devel/swigrapidjson>0: devel/rapidjson${PYTHON_PKGNAMEPREFIX}cmeel-eigen>0: devel/py-cmeel-eigen${PYTHON_PKGNAMEPREFIX}scikit-build-core>=0.11: devel/py-scikit-build-core${PYTHON_PKGNAMEPREFIX}setuptools-scm>0: devel/py-setuptools-scm${PYTHON_PKGNAMEPREFIX}swig>0: devel/py-swig
Library 4
libcoordgen.so: science/coordgenlibslibmaeparser.so: science/maeparserlibopenbabel.so: science/openbabellibxml2.so: textproc/libxml2
The full lists below include those, and their dependencies in turn.
Build dependencies 120
- accessibility/at-spi2-core
- archivers/brotli
- archivers/libdeflate
- archivers/liblz4
- archivers/libmspack
- archivers/lzo2
- archivers/zstd
- converters/fribidi
- converters/libiconv
- databases/gdbm
- databases/sqlite3
- devel/boost-libs
- devel/cmake-core
- devel/dbus
- devel/dbus-glib
- devel/gettext-runtime
- devel/glib20
- devel/gobject-introspection
- devel/gsettings-desktop-schemas
- devel/icu
- devel/jsoncpp
- devel/libdaemon
- devel/libdatrie
- devel/libedit
- devel/libevent
- devel/libffi
- devel/libinotify
- devel/libpciaccess
- devel/libsoup
- devel/libthai
- devel/libunistring
- devel/libunwind
- devel/libuv
- devel/orc
- devel/pcre2
- devel/py-build
- devel/py-cmeel
- devel/py-cmeel-eigen
- devel/py-installer
- devel/py-packaging
- devel/py-pathspec
- devel/py-pyproject-hooks
- devel/py-scikit-build-core
- devel/py-setuptools
- devel/py-setuptools-scm
- devel/py-swig
- devel/rapidjson
- devel/readline
- devel/swig
- dns/libidn2
- dns/libpsl
- ftp/curl
- graphics/cairo
- graphics/gdk-pixbuf2
- graphics/graphite2
- graphics/gtk-update-icon-cache
- graphics/jbigkit
- graphics/jpeg-turbo
- graphics/lerc
- graphics/libGLU
- graphics/libdrm
- graphics/libglvnd
- graphics/png
- graphics/tiff
- lang/python312
- lang/python315
- lang/tcl86
- math/libtommath
- math/mpdecimal
- misc/hicolor-icon-theme
- misc/hwdata
- misc/iso-codes
- misc/shared-mime-info
- multimedia/gstreamer1
- multimedia/gstreamer1-plugins
- net/avahi-app
- net/glib-networking
- net/libproxy
- ports-mgmt/pkg
- print/cups
- print/freetype2
- print/harfbuzz
- print/indexinfo
- print/libpaper
- science/coordgenlibs
- science/maeparser
- science/openbabel
- security/libgcrypt
- security/libgpg-error
- security/libssh2
- security/rhash
- sysutils/gnome_subr
- textproc/expat2
- textproc/libxml2
- www/libnghttp2
- x11-fonts/fontconfig
- x11-fonts/libXft
- x11-toolkits/gtk20
- x11-toolkits/pango
- x11-toolkits/wxgtk30
The first 100 are listed.
Run dependencies 104
- accessibility/at-spi2-core
- archivers/brotli
- archivers/libdeflate
- archivers/liblz4
- archivers/libmspack
- archivers/lzo2
- archivers/zstd
- converters/fribidi
- converters/libiconv
- databases/gdbm
- databases/sqlite3
- devel/boost-libs
- devel/dbus
- devel/dbus-glib
- devel/gettext-runtime
- devel/glib20
- devel/gobject-introspection
- devel/gsettings-desktop-schemas
- devel/icu
- devel/libdaemon
- devel/libdatrie
- devel/libedit
- devel/libevent
- devel/libffi
- devel/libinotify
- devel/libpciaccess
- devel/libsoup
- devel/libthai
- devel/libunistring
- devel/libunwind
- devel/orc
- devel/pcre2
- devel/py-packaging
- devel/py-setuptools
- devel/readline
- dns/libidn2
- dns/libpsl
- ftp/curl
- graphics/cairo
- graphics/gdk-pixbuf2
- graphics/graphite2
- graphics/gtk-update-icon-cache
- graphics/jbigkit
- graphics/jpeg-turbo
- graphics/lerc
- graphics/libGLU
- graphics/libdrm
- graphics/libglvnd
- graphics/png
- graphics/tiff
- lang/python312
- lang/python315
- lang/tcl86
- math/libtommath
- math/mpdecimal
- misc/hicolor-icon-theme
- misc/hwdata
- misc/iso-codes
- misc/shared-mime-info
- multimedia/gstreamer1
- multimedia/gstreamer1-plugins
- net/avahi-app
- net/glib-networking
- net/libproxy
- print/cups
- print/freetype2
- print/harfbuzz
- print/indexinfo
- print/libpaper
- science/coordgenlibs
- science/maeparser
- science/openbabel
- security/libgcrypt
- security/libgpg-error
- security/libssh2
- sysutils/gnome_subr
- textproc/expat2
- textproc/libxml2
- www/libnghttp2
- x11-fonts/fontconfig
- x11-fonts/libXft
- x11-toolkits/gtk20
- x11-toolkits/pango
- x11-toolkits/wxgtk30
- x11/libICE
- x11/libSM
- x11/libX11
- x11/libXau
- x11/libXcomposite
- x11/libXcursor
- x11/libXdamage
- x11/libXdmcp
- x11/libXext
- x11/libXfixes
- x11/libXi
- x11/libXinerama
- x11/libXrandr
- x11/libXrender
- x11/libXres
- x11/libXtst
The first 100 are listed.
No port depends on this one.
Configuration
No options to configure.
- USES
- python
- Service scripts
- none
Files
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| openbabel-3.2.1.tar.gz | 3.6477455e+07 | 3afad3decd3b4343e09af3d98472b72f84cbf9a0fa25c2e4eb102abc334548c3 |
Master sites 1
- PYPI