science/rmf 1.7.2_1
Library to support reading and writing of Rich Molecular Format files
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- Last update
- Commit
97a84ef467- License
- APACHE20
- Categories
- science, graphics
- Package size
- 1356.0 KiB, 8598.5 KiB installed
Description
The library provides support for the Rich Molecular Format (RMF) file format for storing hierarchical molecular data (such as atomic or coarse grained representations of proteins), along with markup, including geometry and score data.
Install
As a binary package — by origin, or by package name:
pkg install science/rmf
pkg install rmfFrom the ports tree:
cd /usr/ports/science/rmf/ && make install cleanTo depend on this port in another port's Makefile:
RUN_DEPENDS= rmf>0:science/rmf
LIB_DEPENDS= libRMF.so:science/rmfPackages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | 1.7.2_1 | 1.7.2_1 | - | 1.7.0_2 | 1.7.2_1 |
| FreeBSD:14:quarterly | 1.7.2_1 | 1.7.2_1 | n/a | 1.7.0_2 | 1.7.2_1 |
| FreeBSD:15:latest | 1.7.2_1 | 1.7.2_1 | n/a | 1.7.0_2 | 1.7.0_2 |
| FreeBSD:15:quarterly | 1.7.2_1 | 1.7.2_1 | n/a | n/a | n/a |
| FreeBSD:16:latest | 1.7.2_1 | 1.7.2_1 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
As this port's Makefile names them.
Library 2
libboost_thread.so: devel/boost-libslibhdf5.so: science/hdf5
The full lists below include those, and their dependencies in turn.
All build dependencies 26
- archivers/liblz4
- archivers/zstd
- devel/binutils
- devel/boost-libs
- devel/cmake-core
- devel/gettext-runtime
- devel/icu
- devel/jsoncpp
- devel/libffi
- devel/libunistring
- devel/libuv
- devel/ninja
- devel/readline
- dns/libidn2
- lang/gcc14
- lang/python312
- math/gmp
- math/mpc
- math/mpdecimal
- math/mpfr
- ports-mgmt/pkg
- print/indexinfo
- science/hdf5
- science/libaec
- security/rhash
- textproc/expat2
All run dependencies 12
Required by 1
Configuration
No options to configure.
- USES
- compiler:c++17-lang cmake:testing localbase:ldflags python:build shebangfix
- Service scripts
- none
Files
pkg-plist 102
- bin/rmf3_dump
- bin/rmf_cat
- bin/rmf_frames
- bin/rmf_info
- bin/rmf_interpolate
- bin/rmf_pdb
- bin/rmf_show
- bin/rmf_signature
- bin/rmf_slice
- bin/rmf_transform
- bin/rmf_update
- bin/rmf_validate
- bin/rmf_xml
- include/RMF.h
- include/RMF/BufferConstHandle.h
- include/RMF/BufferHandle.h
- include/RMF/CoordinateTransformer.h
- include/RMF/Decorator.h
- include/RMF/Enum.h
- include/RMF/FileConstHandle.h
- include/RMF/FileHandle.h
- include/RMF/HDF5.h
- include/RMF/HDF5/ConstAttributes.h
- include/RMF/HDF5/ConstDataSetD.h
- include/RMF/HDF5/ConstFile.h
- include/RMF/HDF5/ConstGroup.h
- include/RMF/HDF5/DataSetAccessPropertiesD.h
- include/RMF/HDF5/DataSetCreationPropertiesD.h
- include/RMF/HDF5/DataSetD.h
- include/RMF/HDF5/DataSetIndexD.h
- include/RMF/HDF5/File.h
- include/RMF/HDF5/Group.h
- include/RMF/HDF5/MutableAttributes.h
- include/RMF/HDF5/Object.h
- include/RMF/HDF5/handle.h
- include/RMF/HDF5/infrastructure_macros.h
- include/RMF/HDF5/internal/types.h
- include/RMF/HDF5/types.h
- include/RMF/ID.h
- include/RMF/Label.h
- include/RMF/NodeConstHandle.h
- include/RMF/NodeHandle.h
- include/RMF/Nullable.h
- include/RMF/RestoreCurrentFrame.h
- include/RMF/SetCurrentFrame.h
- include/RMF/TraverseHelper.h
- include/RMF/Vector.h
- include/RMF/compiler_macros.h
- include/RMF/config.h
- include/RMF/constants.h
- include/RMF/decorator/alias.h
- include/RMF/decorator/alternatives.h
- include/RMF/decorator/bond.h
- include/RMF/decorator/external.h
- include/RMF/decorator/feature.h
- include/RMF/decorator/labels.h
- include/RMF/decorator/physics.h
- include/RMF/decorator/provenance.h
- include/RMF/decorator/publication.h
- include/RMF/decorator/reference.h
- include/RMF/decorator/representation.h
- include/RMF/decorator/sequence.h
- include/RMF/decorator/shape.h
- include/RMF/decorator/uncertainty.h
- include/RMF/decorators.h
- include/RMF/enums.h
- include/RMF/exceptions.h
- include/RMF/info.h
- include/RMF/infrastructure_macros.h
- include/RMF/internal/SharedData.h
- include/RMF/internal/SharedDataCategory.h
- include/RMF/internal/SharedDataData.h
- include/RMF/internal/SharedDataData_impl.h
- include/RMF/internal/SharedDataFile.h
- include/RMF/internal/SharedDataFrames.h
- include/RMF/internal/SharedDataHierarchy.h
- include/RMF/internal/SharedDataKeys.h
- include/RMF/internal/SharedDataUserData.h
- include/RMF/internal/SharedData_impl.h
- include/RMF/internal/Transform.h
- include/RMF/internal/errors.h
- include/RMF/internal/hash.h
- include/RMF/internal/irange.h
- include/RMF/internal/large_set_map.h
- include/RMF/internal/paths.h
- include/RMF/internal/shared_data_factories.h
- include/RMF/internal/shared_data_ranges.h
- include/RMF/internal/small_set_map.h
- include/RMF/internal/swig_helpers.h
- include/RMF/internal/use.h
- include/RMF/keys.h
- include/RMF/log.h
- include/RMF/names.h
- include/RMF/numpy_util.h
- include/RMF/show_hierarchy.h
- include/RMF/signature.h
- include/RMF/traits.h
- include/RMF/types.h
- include/RMF/utility.h
- include/RMF/validate.h
The first 100 are listed.
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| salilab-rmf-1.7.2_GH0.tar.gz | 1.6476654e+07 | 132599e2904e7533c433a3770dc0ceae25e989f7a4d9a0fbeda93623acfdba60 |