science/v_sim 3.9.1_3

Visualization of atomic structures

Repository: FreeBSD ports
Maintainer: [email protected]
License: CeCILL
Categories: science
Package size: 3170.2 KiB, 14966.4 KiB installed

Description

V_Sim visualizes atomic structures such as crystals, grain boundaries and so on (either in .d3 format as defined by F. Lancon, or in plain text format as described in the sample page). The rendering is done in pseudo-3D with colored sphere to represent the atoms. The user can interact through many functions to choose the view, the size of the atoms, their color, the background color, the type of fog... Much of it is detailled in the user guide. Moreover V_Sim allows to export the view as image in GIF, PS or more formats.

Install

As a binary package — by origin, or by package name:

pkg install science/v_sim
pkg install v_sim

From the ports tree:

cd /usr/ports/science/v_sim/ && make install clean

To depend on this port in another port's Makefile:

RUN_DEPENDS=	v_sim>0:science/v_sim
LIB_DEPENDS=	libv_sim-3.so:science/v_sim

Packages

The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.

Repository	aarch64	amd64	armv6	armv7	i386
FreeBSD:14:latest	3.9.1_3	3.9.1_3	-	3.8.0_13	3.9.1_3
FreeBSD:14:quarterly	3.9.1_3	3.9.1_3	n/a	3.8.0_13	3.9.1_3
FreeBSD:15:latest	3.9.1_3	3.9.1_3	n/a	3.8.0_13	3.8.0_13
FreeBSD:15:quarterly	3.9.1_3	3.9.1_3	n/a	n/a	n/a
FreeBSD:16:latest	3.9.1_3	3.9.1_3	n/a	n/a	n/a
FreeBSD:16:quarterly	n/a	n/a	n/a	n/a	n/a

Repository

aarch64

amd64

armv6

armv7

i386

FreeBSD:14:latest

3.9.1_3

3.8.0_13

3.9.1_3

FreeBSD:14:quarterly

3.9.1_3

n/a

3.8.0_13

3.9.1_3

FreeBSD:15:latest

3.9.1_3

n/a

3.8.0_13

FreeBSD:15:quarterly

3.9.1_3

n/a

FreeBSD:16:latest

3.9.1_3

n/a

FreeBSD:16:quarterly

n/a

Dependencies

As this port's Makefile names them.

Build 5

p5-XML-LibXML>0 : textproc/p5-XML-LibXML
libarchive>0 : archivers/libarchive
xcrysden : science/xcrysden
bash : shells/bash
gtkdocize : textproc/gtk-doc

Library 12

libgdkglext-x11-1.0.so : x11-toolkits/gtkglext
libfontconfig.so : x11-fonts/fontconfig
libopenbabel.so : science/openbabel
libfreetype.so : print/freetype2
libepoxy.so : graphics/libepoxy
libharfbuzz.so : print/harfbuzz
libyaml.so : textproc/libyaml
libnetcdf.so : science/netcdf
libmsym.so : science/libmsym
libpng16.so : graphics/png
libftgl.so : graphics/ftgl
libxc.so : science/libxc

Runtime 4

${PYTHON_PKGNAMEPREFIX}numpy>=1.16 : math/py-numpy
xcrysden : science/xcrysden
libarchive>0 : archivers/libarchive
${PYTHON_PKGNAMEPREFIX}matplotlib>0 : math/py-matplotlib

The full lists below include those, and their dependencies in turn.

All build dependencies 240

The first 100 are listed.

All run dependencies 240

The first 100 are listed.

No port depends on this one.

Configuration

Options name: science_v_sim

Option	Default	Description
DOCS	off	Build and/or install documentation
EXAMPLES	off	Build and/or install examples
NLS	off	Native Language Support

Option

Default

Description

DOCS

off

Build and/or install documentation

EXAMPLES

off

Build and/or install examples

NLS

off

Native Language Support

USES: autoreconf blaslapack compiler:c11 fortran gl gmake gnome libtool:keepla localbase:ldflags pkgconfig python shebangfix tar:bzip2 xorg
Service scripts: none

Files

Manual pages 1

v_sim(1)

pkg-plist 150

bin/v_sim
lib/girepository-1.0/v_sim-3.9.typelib
lib/libv_sim-3.a
lib/libv_sim-3.la
lib/libv_sim-3.so
lib/libv_sim-3.so.9
lib/libv_sim-3.so.9.0.0
lib/v_sim/plug-ins/libabinit.a
lib/v_sim/plug-ins/libabinit.la
lib/v_sim/plug-ins/libabinit.so
lib/v_sim/plug-ins/libabinit.so.9
lib/v_sim/plug-ins/libabinit.so.9.0.0
lib/v_sim/plug-ins/libarchives.a
lib/v_sim/plug-ins/libarchives.la
lib/v_sim/plug-ins/libarchives.so
lib/v_sim/plug-ins/libarchives.so.9
lib/v_sim/plug-ins/libarchives.so.9.0.0
lib/v_sim/plug-ins/libcube.a
lib/v_sim/plug-ins/libcube.la
lib/v_sim/plug-ins/libcube.so
lib/v_sim/plug-ins/libcube.so.9
lib/v_sim/plug-ins/libcube.so.9.0.0
lib/v_sim/plug-ins/libetsf.a
lib/v_sim/plug-ins/libetsf.la
lib/v_sim/plug-ins/libetsf.so
lib/v_sim/plug-ins/libetsf.so.9
lib/v_sim/plug-ins/libetsf.so.9.0.0
lib/v_sim/plug-ins/libobloader.a
lib/v_sim/plug-ins/libobloader.la
lib/v_sim/plug-ins/libobloader.so
lib/v_sim/plug-ins/libobloader.so.9
lib/v_sim/plug-ins/libobloader.so.9.0.0
lib/v_sim/plug-ins/libplugmsym.a
lib/v_sim/plug-ins/libplugmsym.la
lib/v_sim/plug-ins/libplugmsym.so
lib/v_sim/plug-ins/libplugmsym.so.9
lib/v_sim/plug-ins/libplugmsym.so.9.0.0
lib/v_sim/plug-ins/libpythongi.a
lib/v_sim/plug-ins/libpythongi.la
lib/v_sim/plug-ins/libpythongi.so
lib/v_sim/plug-ins/libpythongi.so.9
lib/v_sim/plug-ins/libpythongi.so.9.0.0
lib/v_sim/plug-ins/libxsf.a
lib/v_sim/plug-ins/libxsf.la
lib/v_sim/plug-ins/libxsf.so
lib/v_sim/plug-ins/libxsf.so.9
lib/v_sim/plug-ins/libxsf.so.9.0.0
share/doc/v_sim/ChangeLog.en
share/doc/v_sim/ChangeLog.fr
share/doc/v_sim/authors
share/doc/v_sim/licence.en.txt
share/doc/v_sim/licence.fr.txt
share/doc/v_sim/pot2surf_help
share/doc/v_sim/readme
share/examples/v_sim/ab_silicon.in
share/examples/v_sim/aluminium.d3
share/examples/v_sim/cinchonidine.xsf.bz2
share/examples/v_sim/cinchonidine.yaml
share/examples/v_sim/cnt.Benzen_on_Ag111
share/examples/v_sim/collisions.ascii
share/examples/v_sim/coord_vib_g_co.xyz
share/examples/v_sim/demo-browser.tar.gz
share/examples/v_sim/demo.ascii
share/examples/v_sim/demo.d3
share/examples/v_sim/demo.xyz
share/examples/v_sim/demo_spin.d3
share/examples/v_sim/demo_spin.spin
share/examples/v_sim/density-sih4.dat
share/examples/v_sim/diff.ascii
share/examples/v_sim/diff.dat
share/examples/v_sim/h2o-dens.cube.bz2
share/examples/v_sim/nq-netcdf.cdl
share/examples/v_sim/nq-netcdf.nc
share/examples/v_sim/planes.xml
share/examples/v_sim/pygi_collisions.v_sim.py
share/examples/v_sim/pygi_isolate.v_sim.py
share/examples/v_sim/pygi_load.v_sim.py
share/examples/v_sim/pygi_plot.v_sim.py
share/examples/v_sim/pygi_rightMenu.v_sim.py
share/examples/v_sim/pygi_rotate.v_sim.py
share/examples/v_sim/si1002x1-o_DS1_DEN-etsf.nc
share/examples/v_sim/silane.nc
share/examples/v_sim/test_isosurfaces.ascii
share/examples/v_sim/test_isosurfaces.surf
share/examples/v_sim/values.xml
share/gir-1.0/v_sim-3.9.gir
share/icons/hicolor/16x16/apps/v_sim.png
share/icons/hicolor/22x22/apps/v_sim.png
share/icons/hicolor/24x24/apps/v_sim.png
share/icons/hicolor/32x32/apps/v_sim.png
share/icons/hicolor/48x48/apps/v_sim.png
share/icons/hicolor/scalable/apps/v_sim.svg
share/locale/fr/LC_MESSAGES/v_sim.mo
share/man/man1/v_sim.1.gz
share/pixmaps/v_sim.xpm
share/v_sim/pixmaps/abinit.png
share/v_sim/pixmaps/archives.png
share/v_sim/pixmaps/axes-angles.png
share/v_sim/pixmaps/axes-box.png
share/v_sim/pixmaps/axes-button.png

The first 100 are listed.

distinfo 1

File	Size	SHA256
l_sim-v_sim-f96c25a8aa1f4a149dd45fcb52de7216e65996a9_GL0.tar.gz	6.27254e+06	64e948d6e1da41bafba7b7932b27c8055be4ea67ec45f57305b87ecbb5c9c357

File

Size

SHA256

l_sim-v_sim-f96c25a8aa1f4a149dd45fcb52de7216e65996a9_GL0.tar.gz

6.27254e+06

64e948d6e1da41bafba7b7932b27c8055be4ea67ec45f57305b87ecbb5c9c357

Commit history 0

No commits in the history this site was built from.