biology/py-multiqc 1.35 FreeBSD

Aggregate bioinformatics analysis reports across samples and tools

System: FreeBSD
Repository: FreeBSD ports
Maintainer: [email protected]
Last update: 2026-10-08
Commit: 2414383046
License: GPLv3
Categories: biology, python

Description

MultiQC searches a given directory for analysis logs and compiles an HTML report. It's a general use tool, perfect for summarising the output from numerous bioinformatics tools.

In the other systems

System

Port

Version

FreeBSD

biology/py-multiqc

1.35

NetBSD

biology/py-multiqc

1.25.2nb1

HardenedBSD

biology/py-multiqc

1.35

Install

Binary package:

pkg install py312-multiqc

From the ports tree:

cd /usr/ports/biology/py-multiqc/ && make install clean

To depend on this port in another port's Makefile:

RUN_DEPENDS=	py312-multiqc>0:biology/py-multiqc

Packages

The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.

Repository

aarch64

amd64

armv6

armv7

i386

FreeBSD:14:latest

1.25.2_2

FreeBSD:14:quarterly

n/a

1.25.2_2

FreeBSD:15:latest

1.35

n/a

1.25.2_2

FreeBSD:15:quarterly

1.35

n/a

FreeBSD:16:latest

1.35

n/a

FreeBSD:16:quarterly

n/a

Dependencies

As this port's Makefile names them.

Build 1

${PYTHON_PKGNAMEPREFIX}wheel>0 : devel/py-wheel

Runtime 25

${PYTHON_PKGNAMEPREFIX}boto3>0 : www/py-boto3
${PYTHON_PKGNAMEPREFIX}click>0 : devel/py-click
${PYTHON_PKGNAMEPREFIX}humanize>0 : devel/py-humanize
${PYTHON_PKGNAMEPREFIX}importlib-metadata>0 : devel/py-importlib-metadata
${PYTHON_PKGNAMEPREFIX}Jinja2>=3.0.0 : devel/py-Jinja2
${PYTHON_PKGNAMEPREFIX}kaleido>=0.2.1 : graphics/py-kaleido
${PYTHON_PKGNAMEPREFIX}markdown>0 : textproc/py-markdown
${PYTHON_PKGNAMEPREFIX}packaging>0 : devel/py-packaging
${PYTHON_PKGNAMEPREFIX}requests>0 : www/py-requests
${PYTHON_PKGNAMEPREFIX}pillow>=10 : graphics/py-pillow
${PYTHON_PKGNAMEPREFIX}plotly>=5.18 : graphics/py-plotly
${PYTHON_PKGNAMEPREFIX}pyyaml>=4 : devel/py-pyyaml
${PYTHON_PKGNAMEPREFIX}rich>=10 : textproc/py-rich
${PYTHON_PKGNAMEPREFIX}rich-click>0 : devel/py-rich-click
${PYTHON_PKGNAMEPREFIX}coloredlogs>0 : devel/py-coloredlogs
${PYTHON_PKGNAMEPREFIX}spectra>=0.0.10 : graphics/py-spectra
${PYTHON_PKGNAMEPREFIX}pydantic2>=2.7.0 : devel/py-pydantic2
${PYTHON_PKGNAMEPREFIX}typeguard>0 : devel/py-typeguard
${PYTHON_PKGNAMEPREFIX}tqdm>0 : misc/py-tqdm
${PYTHON_PKGNAMEPREFIX}python-dotenv>0 : www/py-python-dotenv
${PYTHON_PKGNAMEPREFIX}natsort>0 : devel/py-natsort
${PYTHON_PKGNAMEPREFIX}tiktoken>=0.7.0 : textproc/py-tiktoken
${PYTHON_PKGNAMEPREFIX}jsonschema>0 : devel/py-jsonschema
${PYTHON_PKGNAMEPREFIX}polars>=1.33.1 : misc/py-polars
${PYTHON_PKGNAMEPREFIX}pyarrow>0 : databases/py-pyarrow

The full lists below include those, and their dependencies in turn.

Build dependencies 16

Run dependencies 368

The first 100 are listed.

Required by 4

Configuration

No options to configure.

USES: python shebangfix
Service scripts: none

Files

distinfo 1

File

Size

SHA256

multiqc-1.35.tar.gz

5.45176e+06

5a4aa6480e6def2f9c0af2893358bf7ec5c304d606ecf613cd25ddcd0e244e77

Master sites 1

PYPI

Commit history 2

Date Commit Credits Log message

2026-10-08

2414383046

Jason W. Bacon

Release numerous ports to ports@

I've been retired for a few years, and it is unlikely I will be doing any more scientific computing support in the future. I have continued to maintain ~160 ports to the best of my ability, mainly as a favor to the community, but I can no longer justify the time and effort required. I am therefore releasing most of my scientific ports, along with a few others, to ports@. I will continue to maintain ports I am actively using and those for which I am upstream.

2026-09-15

ff5be8789f

Jason W. Bacon

biology/py-multiqc: Update to 1.35

Many fixes and new features since 1.25.2 Changes: https://github.com/MultiQC/MultiQC/releases Reported by: portscout