BSD Ports

archivers/vbz-compression 1.0.3 DragonFly

Variable byte integer encoding to compress Oxford Nanopore signal data

System
DragonFly
Repository
DPorts
Maintainer
[email protected] (as in FreeBSD)
License
MPL20
Categories
archivers
Package size
27.8 KiB, 84.6 KiB installed

Description

VBZ Compression uses variable byte integer encoding to compress Oxford Nanopore signal data. The performance of VBZ is achieved by taking advantage of the properties of the raw signal and therefore is most effective when applied to the signal dataset. Other datasets you may have in your Fast5 files will not be able to take advantage of the default VBZ settings for compression. VBZ will be used as the default compression scheme in a future release of MinKNOW.

In the other systems

SystemPortVersion
DragonFlyarchivers/vbz-compression1.0.3
FreeBSDarchivers/vbz-compression1.0.13
HardenedBSDarchivers/vbz-compression1.0.13
GhostBSDarchivers/vbz-compression1.0.13

Install

Binary package:

pkg install vbz-compression

From DPorts:

cd /usr/dports/archivers/vbz-compression && make install clean

Dependencies

Run dependencies 2
Required by 1