BSD Portsbiology/py-cutadapt 4.7nb1 NetBSD
Find and remove adapter sequences, primers, poly-A tails, etc
- System
- NetBSD
- Repository
- pkgsrc
- Maintainer
- [email protected]
- Last update
- Commit
65c9b1c391- License
- mit
- Categories
- biology, python
- Package size
- 288.3 KiB, 1449.6 KiB installed
Description
Cutadapt finds and removes adapter sequences, primers, poly-A tails and other types of unwanted sequence from your high-throughput sequencing reads.
In the other systems
The newest version among them is 5.2, as upstream numbers it.
| System | Port | Version | Vulnerabilities | Status | Maintainer | Last update |
|---|---|---|---|---|---|---|
| NetBSD | biology/py-cutadapt | 4.7nb1 | none known | - | [email protected] | 2026-10-16 |
| FreeBSD | biology/py-cutadapt | 5.2 newest | none known | - | [email protected] | - |
| DragonFly | biology/py-cutadapt | 5.0_1 | none known | - | [email protected] | - |
| HardenedBSD | biology/py-cutadapt | 5.2 newest | no data | - | [email protected] | - |
| GhostBSD | biology/py-cutadapt | 5.2 newest | no data | - | [email protected] | - |
Install
Binary package:
pkgin install py312-cutadaptFrom pkgsrc:
cd /usr/pkgsrc/biology/py-cutadapt && make install cleanPackages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | Version |
|---|---|
| NetBSD 10.1 x86_64 | 4.7nb1 |
| NetBSD 10.1 aarch64 | 4.7nb1 |
| SmartOS / illumos x86_64 | - |
| macOS 15 arm64 | 4.7nb1 |
Dependency graph
Ports that need it on the left, what it needs to run on the right; at most 8 of each. "Dependencies" below lists them all.
Dependencies
Run dependencies 3
Required by 2
Configuration
No options to configure.
- Service scripts
- none
- Flavors
py313-cutadapt-4.7nb1,py314-cutadapt-4.7nb1