BSD Portsbiology/seqtk 1.4 NetBSD
Tool for processing sequences in FASTA/FASTQ format
- System
- NetBSD
- Repository
- pkgsrc
- Maintainer
- [email protected]
- License
- gnu-gpl-v2
- Categories
- biology
- Package size
- 34.9 KiB, 81.8 KiB installed
Description
Seqtk is a fast and lightweight tool for processing sequences in the FASTA or FASTQ format. It seamlessly parses both FASTA and FASTQ files which can also be optionally compressed by gzip. It performs basic file conversions and edits much like standard Unix tools do with text files.
In the other systems
| System | Port | Version |
|---|---|---|
| NetBSD | biology/seqtk | 1.4 |
| FreeBSD | biology/seqtk | 1.5 |
| DragonFly | biology/seqtk | 1.4 |
| HardenedBSD | biology/seqtk | 1.5 |
| GhostBSD | biology/seqtk | 1.5 |
Install
Binary package:
pkgin install seqtkFrom pkgsrc:
cd /usr/pkgsrc/biology/seqtk && make install cleanPackages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | Version |
|---|---|
| NetBSD 10.1 x86_64 | 1.4 |
| NetBSD 10.1 aarch64 | 1.4 |
| SmartOS / illumos x86_64 | 1.4 |
| macOS 15 arm64 | 1.4 |