BSD Portswip/hisat2 2.2.1nb2 NetBSD
Alignment program for mapping next-generation sequencing reads
- System
- NetBSD
- Repository
- pkgsrc-wip
- Maintainer
- [email protected]
- License
- gnu-gpl-v3
- Categories
- wip, biology
Description
HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (both DNA and RNA) to a population of human genomes (as well as to a single reference genome).
In the other systems
The newest version among them is 2.2.3, as upstream numbers it.
| System | Port | Version | Vulnerabilities | Status | Maintainer | Last update |
|---|---|---|---|---|---|---|
| NetBSD | wip/hisat2 | 2.2.1nb2 | none known | - | [email protected] | - |
| FreeBSD | biology/hisat2 by name | 2.2.3 newest | none known | - | [email protected] | 2026-10-08 |
| DragonFly | biology/hisat2 by name | 2.2.1_2 | none known | - | [email protected] | - |
| HardenedBSD | biology/hisat2 by name | 2.2.3 newest | no data | - | [email protected] | - |
| GhostBSD | biology/hisat2 by name | 2.2.3 newest | no data | - | [email protected] | - |
Install
From pkgsrc-wip (no binary package):
cd /usr/pkgsrc/wip/hisat2 && make install cleanDependencies
Run dependencies 1
No port depends on this one.