science/libminc 2.5.0
Core library and API of the MINC toolkit
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- License
- MIT
- Categories
- science, biology
- Package size
- 331.8 KiB, 1053.5 KiB installed
Description
MINC - Medical Image NetCDF or MINC isn't netCDF.
The MINC file format is a highly flexible medical image file format built on the HDF5 generalized data format.
Note: previously, this port was science/mint2, but it is now split into two parts: libminc and minc-tools.
Install
As a binary package — by origin, or by package name:
pkg install science/libminc
pkg install libminc
From the ports tree:
cd /usr/ports/science/libminc/ && make install clean
To depend on this port in another port's Makefile:
RUN_DEPENDS= libminc>0:science/libminc
LIB_DEPENDS= libminc2.so:science/libminc
Packages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | 2.5.0 | 2.5.0 | - | - | 2.5.0 |
| FreeBSD:14:quarterly | 2.5.0 | 2.5.0 | n/a | - | 2.5.0 |
| FreeBSD:15:latest | 2.5.0 | 2.5.0 | n/a | - | - |
| FreeBSD:15:quarterly | 2.5.0 | 2.5.0 | n/a | n/a | n/a |
| FreeBSD:16:latest | 2.5.0 | 2.5.0 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
As this port's Makefile names them.
Build 1
nifticlib>0: science/nifticlib
Library 2
libhdf5.so: science/hdf5libnetcdf.so: science/netcdf
The full lists below include those, and their dependencies in turn.
All build dependencies 32
- archivers/brotli
- archivers/liblz4
- archivers/zstd
- devel/binutils
- devel/cmake-core
- devel/gettext-runtime
- devel/jsoncpp
- devel/libffi
- devel/libunistring
- devel/libuv
- devel/ninja
- devel/pkgconf
- devel/readline
- dns/libidn2
- dns/libpsl
- ftp/curl
- lang/gcc14
- lang/python312
- math/gmp
- math/mpc
- math/mpdecimal
- math/mpfr
- ports-mgmt/pkg
- print/indexinfo
- science/hdf5
- science/libaec
- science/netcdf
- science/nifticlib
- security/libssh2
- security/rhash
- textproc/expat2
- www/libnghttp2
All run dependencies 19
Required by 1
Configuration
No options to configure.
- USES
- cmake:testing localbase
- Service scripts
- none
Message after installing
Files
pkg-plist 50
- include/ParseArgv.h
- include/minc.h
- include/minc2.h
- include/minc2_api.h
- include/minc2_defs.h
- include/minc2_error.h
- include/minc2_structs.h
- include/minc_1_rw.h
- include/minc_1_simple.h
- include/minc_1_simple_rw.h
- include/minc_common_defs.h
- include/minc_compat.h
- include/minc_config.h
- include/minc_error.h
- include/minc_format_convert.h
- include/minc_io_4d_volume.h
- include/minc_io_exceptions.h
- include/minc_io_fixed_vector.h
- include/minc_io_simple_volume.h
- include/minc_simple.h
- include/nd_loop.h
- include/read_file_names.h
- include/restructure.h
- include/time_stamp.h
- include/volume_io.h
- include/volume_io/alloc.h
- include/volume_io/arrays.h
- include/volume_io/basic.h
- include/volume_io/def_math.h
- include/volume_io/files.h
- include/volume_io/geom_structs.h
- include/volume_io/geometry.h
- include/volume_io/multidim.h
- include/volume_io/progress.h
- include/volume_io/string_funcs.h
- include/volume_io/system_dependent.h
- include/volume_io/transforms.h
- include/volume_io/vol_io_prototypes.h
- include/volume_io/volume.h
- include/volume_io/volume_cache.h
- include/voxel_loop.h
- lib/cmake/FindNETCDF.cmake
- lib/cmake/LIBMINC-targets-.cmake
- lib/cmake/LIBMINC-targets.cmake
- lib/cmake/LIBMINCConfig.cmake
- lib/cmake/UseLIBMINC.cmake
- lib/libminc2.so
- lib/libminc2.so.5.3.0
- lib/libminc_io.so
- lib/libminc_io.so.5.3.0
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| BIC-MNI-libminc-release-2.5.0_GH0.tar.gz | 823875 | 57d807e86a353a93024a8849f5e21e2abea4f09f0be934e1f538bdc2b02f8885 |
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