BSD Portswip/bcftools 1.22 NetBSD
Tools for manipulating BCF and VCF variant call files
- System
- NetBSD
- Repository
- pkgsrc-wip
- Maintainer
- [email protected]
- License
- mit
- Categories
- wip, biology
Description
BCFtools is a set of utilities that manipulate variant calls in the Variant Call Format (VCF) and its binary counterpart BCF. All commands work transparently with both VCFs and BCFs, both uncompressed and BGZF-compressed.
In the other systems
| System | Port | Version |
|---|---|---|
| NetBSD | wip/bcftools | 1.22 |
| FreeBSD | biology/bcftools | 1.24 |
| DragonFly | biology/bcftools | 1.21 |
| HardenedBSD | biology/bcftools | 1.24 |
| GhostBSD | biology/bcftools | 1.24 |
Install
From pkgsrc-wip (no binary package):
cd /usr/pkgsrc/wip/bcftools && make install cleanDependencies
Run dependencies 3
No port depends on this one.