BSD Portsscience/libccp4 8.0.0 FreeBSD
Protein X-ray crystallography toolkit
- System
- FreeBSD
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- License
- GPLv3, LGPL3
- Categories
- science, education
Description
CCP4 is a world-leading, integrated software suite for macromolecular structure determination using X-ray crystallography and other biophysical techniques. It provides a comprehensive collection of programs covering all stages of the process, from data processing and phasing (e.g., Crank) to molecular replacement (e.g., Beast, AMPLE), model building (e.g., Buccaneer), refinement (e.g., REFMAC), and validation.
The suite features automated structure solution pipelines and modern graphical user interfaces like CCP4i2. As a community-based resource, CCP4 supports a wide research community and plays a key role in the education and training of scientists in experimental structural biology. Its modular design and Coordinate Library offer flexibility and extensive functionality for structural biologists.
In the other systems
| System | Port | Version |
|---|---|---|
| FreeBSD | science/libccp4 | 8.0.0 |
| DragonFly | science/libccp4 | 6.5.1_4 |
Install
Binary package:
pkg install libccp4From the ports tree:
cd /usr/ports/science/libccp4/ && make install cleanTo depend on this port in another port's Makefile:
RUN_DEPENDS= libccp4>0:science/libccp4
LIB_DEPENDS= libccp4c.so:science/libccp4Packages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | - | 8.0.0 | - | 8.0.0 | 8.0.0 |
| FreeBSD:14:quarterly | - | 8.0.0 | n/a | 8.0.0 | 8.0.0 |
| FreeBSD:15:latest | - | 8.0.0 | n/a | 8.0.0 | 8.0.0 |
| FreeBSD:15:quarterly | - | 8.0.0 | n/a | n/a | n/a |
| FreeBSD:16:latest | - | 8.0.0 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
As this port's Makefile names them.
Library 1
libmmdb2.so: science/mmdb2
The full lists below include those, and their dependencies in turn.
Build dependencies 11
Run dependencies 9
Required by 2
Configuration
No options to configure.
- USES
- fortran gmake libtool localbase:ldflags
- Service scripts
- none
Files
pkg-plist 44
- include/ccp4/ccp4_array.h
- include/ccp4/ccp4_errno.h
- include/ccp4/ccp4_file_err.h
- include/ccp4/ccp4_fortran.h
- include/ccp4/ccp4_general.h
- include/ccp4/ccp4_parser.h
- include/ccp4/ccp4_program.h
- include/ccp4/ccp4_spg.h
- include/ccp4/ccp4_sysdep.h
- include/ccp4/ccp4_types.h
- include/ccp4/ccp4_unitcell.h
- include/ccp4/ccp4_utils.h
- include/ccp4/ccp4_vars.h
- include/ccp4/cmap_data.h
- include/ccp4/cmap_errno.h
- include/ccp4/cmap_header.h
- include/ccp4/cmap_labels.h
- include/ccp4/cmap_skew.h
- include/ccp4/cmap_stats.h
- include/ccp4/cmaplib.h
- include/ccp4/cmaplib_f.h
- include/ccp4/cmtzlib.h
- include/ccp4/csymlib.h
- include/ccp4/cvecmat.h
- include/ccp4/library_file.h
- include/ccp4/mtzdata.h
- include/ccp4/overview.h
- include/ccp4/pack_c.h
- include/ccp4/w32mvs.h
- lib/libccp4c.so
- lib/libccp4c.so.0
- lib/libccp4c.so.0.0.0
- lib/libccp4f.so
- lib/libccp4f.so.0
- lib/libccp4f.so.0.0.0
- libdata/pkgconfig/ccp4c.pc
- libdata/pkgconfig/ccp4f.pc
- share/atomsf.lib
- share/atomsf_electron.lib
- share/atomsf_neutron.lib
- share/ccp4/ccp4-config.cmake
- share/font84.ascii
- share/syminfo.lib
- share/symop.lib
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| libccp4-8.0.0.tar.gz | 937534 | cb813ae86612a0866329deab7cee96eac573d81be5b240341d40f9ad5322ff2d |
Master sites 1
- https://ftp.ccp4.ac.uk/opensource/
Commit history 0
No commits in the history this site was built from.