biology/p5-Bio-Cluster 1.7.3_1 FreeBSD
BioPerl cluster modules
- System
- FreeBSD
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- License
- ART10, GPLv1+
- Categories
- biology, perl5
- Package size
- 55.8 KiB, 161.7 KiB installed
Description
Bio::Cluster is the BioPerl cluster modules. Classes and modules here describe the basic structure for a cluster of BioPerl objects.
In the other systems
| System | Port | Version |
|---|---|---|
| FreeBSD | biology/p5-Bio-Cluster | 1.7.3_1 |
| OpenBSD | biology/p5-Bio-Cluster | 1.7.3 |
| DragonFly | biology/p5-Bio-Cluster | 1.7.3_1 |
| HardenedBSD | biology/p5-Bio-Cluster | 1.7.3_1 |
| GhostBSD | biology/p5-Bio-Cluster | 1.7.3_1 |
Install
Binary package:
pkg install p5-Bio-Cluster
From the ports tree:
cd /usr/ports/biology/p5-Bio-Cluster/ && make install clean
To depend on this port in another port's Makefile:
RUN_DEPENDS= p5-Bio-Cluster>0:biology/p5-Bio-Cluster
Packages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | 1.7.3_1 | 1.7.3_1 | 1.7.3_1 | 1.7.3_1 | 1.7.3_1 |
| FreeBSD:14:quarterly | 1.7.3_1 | 1.7.3_1 | n/a | 1.7.3_1 | 1.7.3_1 |
| FreeBSD:15:latest | 1.7.3_1 | 1.7.3_1 | n/a | 1.7.3_1 | 1.7.3_1 |
| FreeBSD:15:quarterly | 1.7.3_1 | 1.7.3_1 | n/a | n/a | n/a |
| FreeBSD:16:latest | 1.7.3_1 | 1.7.3_1 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
As this port's Makefile names them.
Build 3
p5-Bio-Variation>=0: biology/p5-Bio-Variationp5-BioPerl>=0: biology/p5-BioPerlp5-XML-SAX>=0: textproc/p5-XML-SAX
Runtime 3
p5-Bio-Variation>=0: biology/p5-Bio-Variationp5-BioPerl>=0: biology/p5-BioPerlp5-XML-SAX>=0: textproc/p5-XML-SAX
The full lists below include those, and their dependencies in turn.
Build dependencies 77
- biology/p5-Bio-Variation
- biology/p5-BioPerl
- converters/libiconv
- converters/p5-Encode-Locale
- converters/p5-MIME-Base32
- converters/p5-MIME-Base64
- converters/p5-Text-Iconv
- devel/p5-Algorithm-Diff
- devel/p5-Class-Data-Inheritable
- devel/p5-Clone
- devel/p5-Data-Stag
- devel/p5-Devel-StackTrace
- devel/p5-Exception-Class
- devel/p5-Exporter-Tiny
- devel/p5-Heap
- devel/p5-IO-HTML
- devel/p5-IO-String
- devel/p5-IO-Stringy
- devel/p5-IO-Tty
- devel/p5-IPC-Run
- devel/p5-Module-Build
- devel/p5-Set-Object
- devel/p5-Set-Scalar
- devel/p5-Sub-Uplevel
- devel/p5-Test-Deep
- devel/p5-Test-Differences
- devel/p5-Test-Exception
- devel/p5-Test-Most
- devel/p5-Test-RequiresInternet
- devel/p5-Test-Warn
- devel/p5-Tie-IxHash
- devel/p5-TimeDate
- devel/readline
- lang/p5-Error
- lang/p5-List-MoreUtils
- lang/p5-List-MoreUtils-XS
- lang/p5-Try-Tiny
- lang/perl5.42
- math/p5-Graph
- net/p5-Net-HTTP
- net/p5-URI
- print/indexinfo
- security/p5-Authen-NTLM
- security/p5-Digest-HMAC
- security/p5-IO-Socket-SSL
- security/p5-Net-SSLeay
- sysutils/p5-File-Listing
- textproc/expat2
- textproc/libxml2
- textproc/p5-HTML-Entities-Numbered
- textproc/p5-Text-Diff
- textproc/p5-XML-DOM
- textproc/p5-XML-Filter-BufferText
- textproc/p5-XML-LibXML
- textproc/p5-XML-NamespaceSupport
- textproc/p5-XML-Parser
- textproc/p5-XML-RegExp
- textproc/p5-XML-SAX
- textproc/p5-XML-SAX-Base
- textproc/p5-XML-SAX-Writer
- textproc/p5-XML-Twig
- textproc/p5-XML-Writer
- textproc/p5-XML-XPath
- textproc/p5-XML-XPathEngine
- textproc/p5-YAML
- textproc/p5-libxml
- www/p5-HTML-Parser
- www/p5-HTML-Tagset
- www/p5-HTML-Tree
- www/p5-HTTP-Cookies
- www/p5-HTTP-Date
- www/p5-HTTP-Message
- www/p5-HTTP-Negotiate
- www/p5-LWP-MediaTypes
- www/p5-Mozilla-CA
- www/p5-WWW-RobotRules
- www/p5-libwww
Run dependencies 77
- biology/p5-Bio-Variation
- biology/p5-BioPerl
- converters/libiconv
- converters/p5-Encode-Locale
- converters/p5-MIME-Base32
- converters/p5-MIME-Base64
- converters/p5-Text-Iconv
- devel/p5-Algorithm-Diff
- devel/p5-Class-Data-Inheritable
- devel/p5-Clone
- devel/p5-Data-Stag
- devel/p5-Devel-StackTrace
- devel/p5-Exception-Class
- devel/p5-Exporter-Tiny
- devel/p5-Heap
- devel/p5-IO-HTML
- devel/p5-IO-String
- devel/p5-IO-Stringy
- devel/p5-IO-Tty
- devel/p5-IPC-Run
- devel/p5-Module-Build
- devel/p5-Set-Object
- devel/p5-Set-Scalar
- devel/p5-Sub-Uplevel
- devel/p5-Test-Deep
- devel/p5-Test-Differences
- devel/p5-Test-Exception
- devel/p5-Test-Most
- devel/p5-Test-RequiresInternet
- devel/p5-Test-Warn
- devel/p5-Tie-IxHash
- devel/p5-TimeDate
- devel/readline
- lang/p5-Error
- lang/p5-List-MoreUtils
- lang/p5-List-MoreUtils-XS
- lang/p5-Try-Tiny
- lang/perl5.42
- math/p5-Graph
- net/p5-Net-HTTP
- net/p5-URI
- print/indexinfo
- security/p5-Authen-NTLM
- security/p5-Digest-HMAC
- security/p5-IO-Socket-SSL
- security/p5-Net-SSLeay
- sysutils/p5-File-Listing
- textproc/expat2
- textproc/libxml2
- textproc/p5-HTML-Entities-Numbered
- textproc/p5-Text-Diff
- textproc/p5-XML-DOM
- textproc/p5-XML-Filter-BufferText
- textproc/p5-XML-LibXML
- textproc/p5-XML-NamespaceSupport
- textproc/p5-XML-Parser
- textproc/p5-XML-RegExp
- textproc/p5-XML-SAX
- textproc/p5-XML-SAX-Base
- textproc/p5-XML-SAX-Writer
- textproc/p5-XML-Twig
- textproc/p5-XML-Writer
- textproc/p5-XML-XPath
- textproc/p5-XML-XPathEngine
- textproc/p5-YAML
- textproc/p5-libxml
- www/p5-HTML-Parser
- www/p5-HTML-Tagset
- www/p5-HTML-Tree
- www/p5-HTTP-Cookies
- www/p5-HTTP-Date
- www/p5-HTTP-Message
- www/p5-HTTP-Negotiate
- www/p5-LWP-MediaTypes
- www/p5-Mozilla-CA
- www/p5-WWW-RobotRules
- www/p5-libwww
Configuration
No options to configure.
- USES
- perl5
- Service scripts
- none
Files
pkg-plist 20
- %%SITE_PERL%%/Bio/Cluster.pm
- %%SITE_PERL%%/Bio/Cluster/ClusterFactory.pm
- %%SITE_PERL%%/Bio/Cluster/FamilyI.pm
- %%SITE_PERL%%/Bio/Cluster/SequenceFamily.pm
- %%SITE_PERL%%/Bio/Cluster/UniGene.pm
- %%SITE_PERL%%/Bio/Cluster/UniGeneI.pm
- %%SITE_PERL%%/Bio/ClusterI.pm
- %%SITE_PERL%%/Bio/ClusterIO.pm
- %%SITE_PERL%%/Bio/ClusterIO/dbsnp.pm
- %%SITE_PERL%%/Bio/ClusterIO/unigene.pm
- %%PERL5_MAN3%%/Bio::Cluster.3.gz
- %%PERL5_MAN3%%/Bio::Cluster::ClusterFactory.3.gz
- %%PERL5_MAN3%%/Bio::Cluster::FamilyI.3.gz
- %%PERL5_MAN3%%/Bio::Cluster::SequenceFamily.3.gz
- %%PERL5_MAN3%%/Bio::Cluster::UniGene.3.gz
- %%PERL5_MAN3%%/Bio::Cluster::UniGeneI.3.gz
- %%PERL5_MAN3%%/Bio::ClusterI.3.gz
- %%PERL5_MAN3%%/Bio::ClusterIO.3.gz
- %%PERL5_MAN3%%/Bio::ClusterIO::dbsnp.3.gz
- %%PERL5_MAN3%%/Bio::ClusterIO::unigene.3.gz
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| Bio-Cluster-1.7.3.tar.gz | 58304 | 1967fb3899b92f245b5bf6cb64ef076fc3f8427b1a96ca5f7b74d220b6191fbb |
Master sites 1
- CPAN
Commit history 0
No commits in the history this site was built from.