biology/p5-Bio-Variation 1.7.5 FreeBSD

BioPerl variation-related functionality

System: FreeBSD
Repository: FreeBSD ports
Maintainer: [email protected]
License: ART10, GPLv1+
Categories: biology, perl5
Package size: 74.7 KiB, 235.7 KiB installed

Description

Bio::Variation::* provides BioPerl variation-related functionality.

In the other systems

System

Port

Version

FreeBSD

biology/p5-Bio-Variation

1.7.5

OpenBSD

biology/p5-Bio-Variation

1.7.5p0

DragonFly

biology/p5-Bio-Variation

1.7.5

Install

Binary package:

pkg install p5-Bio-Variation

From the ports tree:

cd /usr/ports/biology/p5-Bio-Variation/ && make install clean

To depend on this port in another port's Makefile:

RUN_DEPENDS=	p5-Bio-Variation>0:biology/p5-Bio-Variation

Packages

The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.

Repository	aarch64	amd64	armv6	armv7	i386
FreeBSD:14:latest	1.7.5	1.7.5	1.7.5	1.7.5	1.7.5
FreeBSD:14:quarterly	1.7.5	1.7.5	n/a	1.7.5	1.7.5
FreeBSD:15:latest	1.7.5	1.7.5	n/a	1.7.5	1.7.5
FreeBSD:15:quarterly	1.7.5	1.7.5	n/a	n/a	n/a
FreeBSD:16:latest	1.7.5	1.7.5	n/a	n/a	n/a
FreeBSD:16:quarterly	n/a	n/a	n/a	n/a	n/a

Dependencies

As this port's Makefile names them.

Build 4

p5-BioPerl>=0 : biology/p5-BioPerl
p5-IO-String>=0 : devel/p5-IO-String
p5-XML-Twig>=0 : textproc/p5-XML-Twig
p5-XML-Writer>=0.400 : textproc/p5-XML-Writer

Runtime 4

p5-BioPerl>=0 : biology/p5-BioPerl
p5-IO-String>=0 : devel/p5-IO-String
p5-XML-Twig>=0 : textproc/p5-XML-Twig
p5-XML-Writer>=0.400 : textproc/p5-XML-Writer

The full lists below include those, and their dependencies in turn.

Build dependencies 76

Run dependencies 76

Required by 4

Configuration

No options to configure.

USES: perl5
Service scripts: none

Files

pkg-plist 26

bin/bp_flanks
%%SITE_PERL%%/Bio/Variation.pm
%%SITE_PERL%%/Bio/Variation/AAChange.pm
%%SITE_PERL%%/Bio/Variation/AAReverseMutate.pm
%%SITE_PERL%%/Bio/Variation/Allele.pm
%%SITE_PERL%%/Bio/Variation/DNAMutation.pm
%%SITE_PERL%%/Bio/Variation/IO.pm
%%SITE_PERL%%/Bio/Variation/IO/flat.pm
%%SITE_PERL%%/Bio/Variation/IO/xml.pm
%%SITE_PERL%%/Bio/Variation/RNAChange.pm
%%SITE_PERL%%/Bio/Variation/SNP.pm
%%SITE_PERL%%/Bio/Variation/SeqDiff.pm
%%SITE_PERL%%/Bio/Variation/VariantI.pm
%%PERL5_MAN1%%/bp_flanks.1.gz
%%PERL5_MAN3%%/Bio::Variation.3.gz
%%PERL5_MAN3%%/Bio::Variation::AAChange.3.gz
%%PERL5_MAN3%%/Bio::Variation::AAReverseMutate.3.gz
%%PERL5_MAN3%%/Bio::Variation::Allele.3.gz
%%PERL5_MAN3%%/Bio::Variation::DNAMutation.3.gz
%%PERL5_MAN3%%/Bio::Variation::IO.3.gz
%%PERL5_MAN3%%/Bio::Variation::IO::flat.3.gz
%%PERL5_MAN3%%/Bio::Variation::IO::xml.3.gz
%%PERL5_MAN3%%/Bio::Variation::RNAChange.3.gz
%%PERL5_MAN3%%/Bio::Variation::SNP.3.gz
%%PERL5_MAN3%%/Bio::Variation::SeqDiff.3.gz
%%PERL5_MAN3%%/Bio::Variation::VariantI.3.gz

distinfo 1

File

Size

SHA256

Bio-Variation-1.7.5.tar.gz

60430

4bffdd060b5e793919f700e46056eb3f0195ed4df2e60ad68b383c31e51f824f

Master sites 1

CPAN

Commit history 0

No commits in the history this site was built from.