BSD Ports

biology/htslib 1.21 DragonFly

C library for high-throughput sequencing data formats

System
DragonFly
Repository
DPorts
Maintainer
[email protected] (as in FreeBSD)
License
BSD3CLAUSE, MIT
Categories
biology, devel
Package size
1044.2 KiB, 7001.2 KiB installed

Description

HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM, CRAM, VCF, and BCF, used for high-throughput sequencing data. It is the core library used by samtools and bcftools.

In the other systems

SystemPortVersion
DragonFlybiology/htslib1.21
FreeBSDbiology/htslib1.24_1
NetBSDbiology/htslib1.21nb9
HardenedBSDbiology/htslib1.24
GhostBSDbiology/htslib1.24

Install

Binary package:

pkg install htslib

From DPorts:

cd /usr/dports/biology/htslib && make install clean

Dependencies

Run dependencies 3