BSD Portsscience/py-dipy 1.12.1 FreeBSD
Python toolbox for analysis of MR diffusion imaging
- System
- FreeBSD
- Repository
- FreeBSD ports
- Maintainer
- [email protected]
- Last update
- Commit
7dac3c229b- License
- BSD3CLAUSE
- Categories
- science, python
Description
DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.
Install
Binary package:
pkg install py312-dipyFrom the ports tree:
cd /usr/ports/science/py-dipy/ && make install cleanTo depend on this port in another port's Makefile:
RUN_DEPENDS= py312-dipy>0:science/py-dipyPackages
The version each package repository carries. “-” means the repository builds no package of it, “n/a” that there is no such repository.
| Repository | aarch64 | amd64 | armv6 | armv7 | i386 |
|---|---|---|---|---|---|
| FreeBSD:14:latest | - | 1.12.1 | - | - | 1.12.1 |
| FreeBSD:14:quarterly | - | 1.12.1 | n/a | - | 1.12.1 |
| FreeBSD:15:latest | - | 1.12.1 | n/a | - | - |
| FreeBSD:15:quarterly | - | 1.12.1 | n/a | n/a | n/a |
| FreeBSD:16:latest | - | 1.12.1 | n/a | n/a | n/a |
| FreeBSD:16:quarterly | n/a | n/a | n/a | n/a | n/a |
Dependencies
As this port's Makefile names them.
Build 4
${PYTHON_PKGNAMEPREFIX}meson-python>=0.13: devel/meson-python${PYTHON_PKGNAMEPREFIX}numpy>=1.22.4: math/py-numpy${PYTHON_PKGNAMEPREFIX}scipy>=1.8: science/py-scipy${PYTHON_PKGNAMEPREFIX}wheel>0: devel/py-wheel
Runtime 7
${PYTHON_PKGNAMEPREFIX}h5py>=3.1.0: science/py-h5py${PYTHON_PKGNAMEPREFIX}nibabel>=3.0.0: science/py-nibabel${PYTHON_PKGNAMEPREFIX}numpy>=1.22.4: math/py-numpy${PYTHON_PKGNAMEPREFIX}packaging>=21: devel/py-packaging${PYTHON_PKGNAMEPREFIX}scipy>=1.8: science/py-scipy${PYTHON_PKGNAMEPREFIX}tqdm>=4.30.0: misc/py-tqdm${PYTHON_PKGNAMEPREFIX}trx-python>=0.4.0: science/py-trx-python
Test 7
${PYTHON_PKGNAMEPREFIX}pandas>0: math/py-pandas${PYTHON_PKGNAMEPREFIX}scikit-learn>0: science/py-scikit-learn${PYTHON_PKGNAMEPREFIX}statsmodels>=0.14.0: math/py-statsmodels${PYTHON_PKGNAMEPREFIX}tables>0: devel/py-tables${PYTHON_PKGNAMEPREFIX}fury>=0.12.0: graphics/py-fury${PYTHON_PKGNAMEPREFIX}matplotlib>0: math/py-matplotlib${PYTHON_PKGNAMEPREFIX}cvxpy>0: math/py-cvxpy
The full lists below include those, and their dependencies in turn.
Build dependencies 30
- archivers/liblz4
- archivers/zstd
- devel/binutils
- devel/gettext-runtime
- devel/libffi
- devel/meson
- devel/meson-python
- devel/ninja
- devel/py-build
- devel/py-installer
- devel/py-packaging
- devel/py-pyproject-hooks
- devel/py-pyproject-metadata
- devel/py-wheel
- devel/readline
- lang/cython
- lang/gcc14
- lang/python312
- lang/python315
- math/gmp
- math/mpc
- math/mpdecimal
- math/mpfr
- math/openblas
- math/py-numpy
- math/qhull
- print/indexinfo
- science/py-scipy
- sysutils/patchelf
- textproc/expat2
Run dependencies 37
- archivers/liblz4
- archivers/zstd
- devel/binutils
- devel/gettext-runtime
- devel/libffi
- devel/py-annotated-doc
- devel/py-cachebox
- devel/py-deepdiff
- devel/py-orderly-set
- devel/py-packaging
- devel/py-shellingham
- devel/py-typer
- devel/py-typing-extensions
- devel/readline
- lang/gcc14
- lang/python312
- lang/python315
- math/gmp
- math/mpc
- math/mpdecimal
- math/mpfr
- math/openblas
- math/py-numpy
- math/qhull
- misc/py-tqdm
- print/indexinfo
- science/hdf5
- science/libaec
- science/py-h5py
- science/py-nibabel
- science/py-scipy
- science/py-trx-python
- textproc/expat2
- textproc/py-markdown-it-py
- textproc/py-mdurl
- textproc/py-pygments
- textproc/py-rich
No port depends on this one.
Configuration
No options to configure.
- USES
- python shebangfix
- Service scripts
- none
Files
pkg-plist 1297
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The first 100 are listed.
distinfo 1
| File | Size | SHA256 |
|---|---|---|
| dipy-1.12.1.tar.gz | 6.710961e+06 | d9690eb29ab10c6acd7b8e93988b87c80bbb927b091c8f78f2c65b40122c71dd |
Master sites 1
- PYPI