| science/py-mmcif | FreeBSD | 1.2.0 | science/py-mmcif 1.2.0: Library for accessing mmCIF data. FreeBSD port maintained by [email protected]. |
| science/py-mmtf-python | FreeBSD | 1.1.3_4 | science/py-mmtf-python 1.1.3_4: MMTF (Macromolecular Transmission Format) Python API. FreeBSD port maintained by [email protected]. |
| science/py-mne | FreeBSD | 1.13.2 | science/py-mne 1.13.2: Python project for MEG and EEG data analysis. FreeBSD port maintained by [email protected]. |
| science/py-molsym | FreeBSD | 1.3.0 | science/py-molsym 1.3.0: Molecular symmetry detection and SALC construction. FreeBSD port maintained by [email protected]. |
| science/py-mp-api | FreeBSD | 0.47.0 | science/py-mp-api 0.47.0: API for server for the Materials Project. FreeBSD port maintained by [email protected]. |
| science/py-mpcontribs-client | FreeBSD | 5.10.5 | science/py-mpcontribs-client 5.10.5: Client library for MPContribs API on contribs-api.materialsproject.org. FreeBSD port maintained by [email protected]. |
| science/py-mplhep | FreeBSD | 1.3.3 | science/py-mplhep 1.3.3: Matplotlib styles for HEP. FreeBSD port maintained by [email protected]. |
| science/py-mplhep-data | FreeBSD | 0.1.0 | science/py-mplhep-data 0.1.0: Font (Data) sub-package for mplhep. FreeBSD port maintained by [email protected]. |
| science/py-mrchem | FreeBSD | 1.1.4 | science/py-mrchem 1.1.4: MultiResolution Chemistry. FreeBSD port maintained by [email protected]. |
| science/py-ncrystal | FreeBSD | 4.4.6 | science/py-ncrystal 4.4.6: Library for thermal neutron transport in crystals and other materials. FreeBSD port maintained by [email protected]. |
| science/py-neo | FreeBSD | 0.14.6 | science/py-neo 0.14.6: Package for representing electrophysiology data in Python. FreeBSD port maintained by [email protected]. |
| science/py-nglview | FreeBSD | 4.0.1 | science/py-nglview 4.0.1: IPython widget to view molecular structures and trajectories. FreeBSD port maintained by [email protected]. |
| science/py-nibabel | FreeBSD | 5.4.2 | science/py-nibabel 5.4.2: Read/write some common neuroimaging file formats. FreeBSD port maintained by [email protected]. |
| science/py-nixio | FreeBSD | 1.5.4 | science/py-nixio 1.5.4: Python reimplementation of NIX data format. FreeBSD port maintained by [email protected]. |
| science/py-oddt | FreeBSD | 0.7_5 | science/py-oddt 0.7_5: Open Drug Discovery Toolkit. FreeBSD port maintained by [email protected]. |
| science/py-openbabel | FreeBSD | 3.2.1 | science/py-openbabel 3.2.1: Chemical toolbox designed to speak the many languages of chemical data. FreeBSD port maintained by [email protected]. |
| science/py-optking | FreeBSD | 0.5.0_1 | science/py-optking 0.5.0_1: Python version of the PSI4 geometry optimization program by R.A. King. FreeBSD port maintained by [email protected]. |
| science/py-paramz | FreeBSD | 0.10.0 | science/py-paramz 0.10.0: Parameterization framework. FreeBSD port maintained by [email protected]. |
| science/py-penaltymodel | FreeBSD | 1.3.0_2 | science/py-penaltymodel 1.3.0_2: DWave: Utilities and interfaces for using penalty models. FreeBSD port maintained by [email protected]. |
| science/py-periodictable | FreeBSD | 2.1.0_2 | science/py-periodictable 2.1.0_2: Extensible periodic table of the elements pre-populated with data. FreeBSD port maintained by [email protected]. |
| science/py-phono3py | FreeBSD | 4.8.2 | science/py-phono3py 4.8.2: Software to calculate phonon-phonon interaction and related properties. FreeBSD port maintained by [email protected]. |
| science/py-phonopy | FreeBSD | 4.8.3 | science/py-phonopy 4.8.3: Package for phonon calculations at harmonic and quasi-harmonic levels. FreeBSD port maintained by [email protected]. |
| science/py-phonors | FreeBSD | 0.6.0_1 | science/py-phonors 0.6.0_1: Rust kernels for phonopy and phono3py. FreeBSD port maintained by [email protected]. |
| science/py-plumed | FreeBSD | 2.10.0 | science/py-plumed 2.10.0: Python interface to PLUMED. FreeBSD port maintained by [email protected]. |
| science/py-probeinterface | FreeBSD | 0.4.0 | science/py-probeinterface 0.4.0: Python package to handle probe layout and geometry. FreeBSD port maintained by [email protected]. |
| science/py-py3Dmol | FreeBSD | 2.5.5 | science/py-py3Dmol 2.5.5: IPython interface for embedding 3Dmol.js views. FreeBSD port maintained by [email protected]. |
| science/py-pyberny | FreeBSD | 0.7.0_1 | science/py-pyberny 0.7.0_1: Optimizer of molecular geometries with respect to the total energy. FreeBSD port maintained by [email protected]. |
| science/py-pygmo2 | FreeBSD | 2.20.0 | science/py-pygmo2 2.20.0: Python platform to perform parallel computations of optimisation tasks. FreeBSD port maintained by [email protected]. |
| science/py-pyked | FreeBSD | 0.5.0 | science/py-pyked 0.5.0: Package for manipulating Chemical Kinetics Experimental Data files. FreeBSD port maintained by [email protected]. |
| science/py-pymatgen | FreeBSD | 2026.9.24 | science/py-pymatgen 2026.9.24: Python Materials Genomics is a robust materials analysis code. FreeBSD port maintained by [email protected]. |
| science/py-pymatgen-analysis-alloys | FreeBSD | 0.0.9 | science/py-pymatgen-analysis-alloys 0.0.9: PyMatgen add-on library with classes useful for describing alloys. FreeBSD port maintained by [email protected]. |
| science/py-pymatgen-core | FreeBSD | 2026.10.16 | science/py-pymatgen-core 2026.10.16: Python Materials Genomics core data structures and algorithms. FreeBSD port maintained by [email protected]. |
| science/py-pymatgen-io-validation | FreeBSD | 0.1.4 | science/py-pymatgen-io-validation 0.1.4: IO validation for pymatgen. FreeBSD port maintained by [email protected]. |
| science/py-pymbd | FreeBSD | 0.15.0 | science/py-pymbd 0.15.0: Many-body dispersion library. FreeBSD port maintained by [email protected]. |
| science/py-pymol | FreeBSD | 3.1.0 | science/py-pymol 3.1.0: OpenGL-based molecular visualization system. FreeBSD port maintained by [email protected]. |
| science/py-pynrrd | FreeBSD | 1.1.3_2 | science/py-pynrrd 1.1.3_2: Pure Python module for reading and writing NRRD files. FreeBSD port maintained by [email protected]. |
| science/py-pynwb | FreeBSD | 4.2.0 | science/py-pynwb 4.2.0: Package for working with Neurodata stored in the NWB format. FreeBSD port maintained by [email protected]. |
| science/py-pyosf | FreeBSD | 1.0.5_1 | science/py-pyosf 1.0.5_1: Python library for synching with OpenScienceFramework projects. FreeBSD port maintained by [email protected]. |
| science/py-pyphot | FreeBSD | 2.1.1_1 | science/py-pyphot 2.1.1_1: Library for computing photometry from spectra. FreeBSD port maintained by [email protected]. |
| science/py-pyprecice | FreeBSD | 3.4.0 | science/py-pyprecice 3.4.0: Coupling library for partitioned multi-physics simulations. FreeBSD port maintained by [email protected]. |
| science/py-pyqubo | FreeBSD | 1.5.0 | science/py-pyqubo 1.5.0: DWave: Python DSL for constructing QUBOs from mathematical expressions. FreeBSD port maintained by [email protected]. |
| science/py-pyscf | FreeBSD | 2.14.0 | science/py-pyscf 2.14.0: Python module for quantum chemistry. FreeBSD port maintained by [email protected]. |
| science/py-qcelemental | FreeBSD | 0.51.2 | science/py-qcelemental 0.51.2: Essentials for quantum chemistry. FreeBSD port maintained by [email protected]. |
| science/py-qcengine | FreeBSD | 0.52.0 | science/py-qcengine 0.52.0: Quantum chemistry program executor and IO standardizer (QCSchema). FreeBSD port maintained by [email protected]. |
| science/py-qcmanybody | FreeBSD | 0.8.0 | science/py-qcmanybody 0.8.0: Many-body expansion tools for quantum chemistry. FreeBSD port maintained by [email protected]. |
| science/py-qspin | FreeBSD | 2.3.3_3 | science/py-qspin 2.3.3_3: Learn quantum spin and entanglement. FreeBSD port maintained by [email protected]. |
| science/py-quantities | FreeBSD | 0.16.4_2 | science/py-quantities 0.16.4_2: Support for physical quantities with units, based on numpy. FreeBSD port maintained by [email protected]. |
| science/py-rmf | FreeBSD | 1.7.2 | science/py-rmf 1.7.2: Library to support reading and writing of Rich Molecular Format files. FreeBSD port maintained by [email protected]. |
| science/py-rmsd | FreeBSD | 1.7.0 | science/py-rmsd 1.7.0: Calculate root-mean-square deviation (RMSD) between coordinate sets. FreeBSD port maintained by [email protected]. |
| science/py-scikit-fuzzy | FreeBSD | 0.5.0_3 | science/py-scikit-fuzzy 0.5.0_3: Fuzzy logic toolkit for SciPy. FreeBSD port maintained by [email protected]. |
| science/py-scikit-sparse | FreeBSD | 0.5.0 | science/py-scikit-sparse 0.5.0: Sparse matrix package. FreeBSD port maintained by [email protected]. |
| science/py-scipy-stubs | FreeBSD | 1.18.1.1 | science/py-scipy-stubs 1.18.1.1: Type annotations for SciPy. FreeBSD port maintained by [email protected]. |
| science/py-scoria | FreeBSD | 1.0.5_4 | science/py-scoria 1.0.5_4: Lightweight molecule manipulation codebase. FreeBSD port maintained by [email protected]. |
| science/py-seekpath | FreeBSD | 2.2.2 | science/py-seekpath 2.2.2: Obtain, visualize k-vector coefficients in crystal Brillouin zone. FreeBSD port maintained by [email protected]. |
| science/py-segyio | FreeBSD | 1.9.14 | science/py-segyio 1.9.14: Python binding for segyio, the seismic data library. FreeBSD port maintained by [email protected]. |
| science/py-signac | FreeBSD | 2.4.1 | science/py-signac 2.4.1: Manage large and heterogeneous data spaces on the file system. FreeBSD port maintained by [email protected]. |
| science/py-spglib | FreeBSD | 2.8.0 | science/py-spglib 2.8.0: Library for finding and handling crystal symmetries (python binding). FreeBSD port maintained by [email protected]. |
| science/py-symfc | FreeBSD | 1.7.3 | science/py-symfc 1.7.3: Generate symmetrized force constants. FreeBSD port maintained by [email protected]. |
| science/py-tensorflow | FreeBSD | 2.21.0_4 | science/py-tensorflow 2.21.0_4: Computation using data flow graphs for scalable machine learning. FreeBSD port maintained by [email protected]. |
| science/py-thewalrus | FreeBSD | 0.22.0 | science/py-thewalrus 0.22.0: Open source library for hafnian calculation. FreeBSD port maintained by [email protected]. |
| science/py-trainstation | FreeBSD | 1.2 | science/py-trainstation 1.2: Convenient training of linear models. FreeBSD port maintained by [email protected]. |
| science/py-trx-python | FreeBSD | 0.6 | science/py-trx-python 0.6: Experiments with new file format for tractography. FreeBSD port maintained by [email protected]. |
| science/py-tweedledum | FreeBSD | 1.2.0 | science/py-tweedledum 1.2.0: Library for analysis, compilation, synthesis of quantum circuits. FreeBSD port maintained by [email protected]. |
| science/py-vedo | FreeBSD | 2026.6.1_3 | science/py-vedo 2026.6.1_3: Python module for scientific analysis and visualization of 3D objects. FreeBSD port maintained by [email protected]. |
| science/py-veusz | FreeBSD | 4.2.1 | science/py-veusz 4.2.1: Scientific plotting package. FreeBSD port maintained by [email protected]. |
| science/py-xbout | FreeBSD | 0.4.0 | science/py-xbout 0.4.0: Collect data from BOUT++ runs in python using xarray. FreeBSD port maintained by [email protected]. |
| science/q | FreeBSD | 6.0_2 | science/q 6.0_2: Molecular Dynamics (MD) tools. FreeBSD port maintained by [email protected]. |
| science/qbox | FreeBSD | 1.79.0 | science/qbox 1.79.0: First-principles molecular dynamics code. FreeBSD port maintained by [email protected]. |
| science/qiskit-aer | FreeBSD | 0.16.0.1_5 | science/qiskit-aer 0.16.0.1_5: Quantum circuits simulator submodule of the Qiskit framework. FreeBSD port maintained by [email protected]. |
| science/qmcpack | FreeBSD | 4.1.0_4 | science/qmcpack 4.1.0_4: Many-body ab initio Quantum Monte Carlo code for quantum chemistry. FreeBSD port maintained by [email protected]. |
| science/quantum-espresso | FreeBSD | 7.6 | science/quantum-espresso 7.6: Package for research in electronic structure, simulation, optimization. FreeBSD port maintained by [email protected]. |
| science/quantum-espresso-pseudopotentials | FreeBSD | g20220916 | science/quantum-espresso-pseudopotentials g20220916: Pseudopotentials for use with Quantum Espresso. FreeBSD port maintained by [email protected]. |
| science/quantum-jet | FreeBSD | 0.2.2.2_5 | science/quantum-jet 0.2.2.2_5: Cross-platform header-only library for simulating quantum circuits. FreeBSD port maintained by [email protected]. |
| science/qwalk | FreeBSD | 1.0.1.300_6 | science/qwalk 1.0.1.300_6: Quantum Monte Carlo package for quantum chemistry computations. FreeBSD port maintained by [email protected]. |
| science/rdkit | FreeBSD | 2026.03.6 | science/rdkit 2026.03.6: Collection of cheminformatics and machine-learning software. FreeBSD port maintained by [email protected]. |
| science/rmf | FreeBSD | 1.7.2_1 | science/rmf 1.7.2_1: Library to support reading and writing of Rich Molecular Format files. FreeBSD port maintained by [email protected]. |
| science/salome-configuration | FreeBSD | 9.15.0 | science/salome-configuration 9.15.0: Salome Project: Multi-physics simulations: Configuration. FreeBSD port maintained by [email protected]. |
| science/salome-kernel | FreeBSD | 9.11.0_8 | science/salome-kernel 9.11.0_8: Salome Project: Multi-physics simulations: Kernel. FreeBSD port maintained by [email protected]. |
| science/sciplot | FreeBSD | 0.3.1 | science/sciplot 0.3.1: Modern C++ scientific plotting library powered by gnuplot. FreeBSD port maintained by [email protected]. |
| science/seacas | FreeBSD | 2025.10.14_1 | science/seacas 2025.10.14_1: Sandia Engineering Analysis Code Access System (SEACAS). FreeBSD port maintained by [email protected]. |
| science/segyio | FreeBSD | 1.9.14 | science/segyio 1.9.14: Library to interact with SEG-Y & Seismic Unix formatted seismic data. FreeBSD port maintained by [email protected]. |
| science/shelxle | FreeBSD | 1.0.1861 | science/shelxle 1.0.1861: Graphical user interface for small-molecule structure refinement. FreeBSD port maintained by [email protected]. |
| science/siconos | FreeBSD | 4.5.0_4 | science/siconos 4.5.0_4: Simulation framework for nonsmooth dynamical systems. FreeBSD port maintained by [email protected]. |
| science/siesta | FreeBSD | 5.4.2_1 | science/siesta 5.4.2_1: Program to perform efficient electronic structure calculations. FreeBSD port maintained by [email protected]. |
| science/silo | FreeBSD | 4.12.1_1 | science/silo 4.12.1_1: Mesh and field I/O library and scientific database. FreeBSD port maintained by [email protected]. |
| science/simbody | FreeBSD | 3.8.80.a3.f10 | science/simbody 3.8.80.a3.f10: Multibody dynamics library for (bio)mechanical systems simulation. FreeBSD port maintained by [email protected]. |
| science/simgrid | FreeBSD | 4.1_2 | science/simgrid 4.1_2: Simulator of the behavior of large-scale distributed systems. FreeBSD port maintained by [email protected]. |
| science/simint | FreeBSD | 0.8 | science/simint 0.8: Obara-Saika (OS) method of calculating electron repulsion integrals. FreeBSD port maintained by [email protected]. |
| science/simple-dftd3 | FreeBSD | 1.4.0 | science/simple-dftd3 1.4.0: Reimplementation of the DFT-D3 program. FreeBSD port maintained by [email protected]. |
| science/sirius | FreeBSD | 7.11.1_2 | science/sirius 7.11.1_2: Domain specific library for electronic structure calculations. FreeBSD port maintained by [email protected]. |
| science/smith | FreeBSD | 0.1.0_1 | science/smith 0.1.0_1: High order nonlinear thermomechanical simulation code. FreeBSD port maintained by [email protected]. |
| science/smoldyn | FreeBSD | 2.75_1 | science/smoldyn 2.75_1: Biochemical simulator for molecular diffusion, surface interactions. FreeBSD port maintained by [email protected]. |
| science/sparta | FreeBSD | 2024.09.4 | science/sparta 2024.09.4: Gas simulator: SPARTA DSMC software package. FreeBSD port maintained by [email protected]. |
| science/spglib | FreeBSD | 2.8.0 | science/spglib 2.8.0: C library for finding and handling crystal symmetries. FreeBSD port maintained by [email protected]. |
| science/spheral | FreeBSD | 2026.06.0_6 | science/spheral 2026.06.0_6: Environment for hydrodynamical & gravitational numerical simulations. FreeBSD port maintained by [email protected]. |
| science/tblite | FreeBSD | 0.7.0 | science/tblite 0.7.0: Light-weight tight-binding framework. FreeBSD port maintained by [email protected]. |
| science/teem | FreeBSD | 1.11.0 | science/teem 1.11.0: Libraries for representing, processing and visualizing scientific data. FreeBSD port maintained by [email protected]. |
| science/thermofun | FreeBSD | 0.7.1 | science/thermofun 0.7.1: Code for calculating thermodynamic properties of materials. FreeBSD port maintained by [email protected]. |
| science/tinker | FreeBSD | 26.1.2 | science/tinker 26.1.2: General purpose molecular modelling package. FreeBSD port maintained by [email protected]. |
| science/trilinos | FreeBSD | 16.2.0_1 | science/trilinos 16.2.0_1: Solver for multi-physics engineering and scientific problems. FreeBSD port maintained by [email protected]. |
BSD Ports