| benchmarks/py-asv | DragonFly | 0.6.1_1 | benchmarks/py-asv 0.6.1_1: Airspeed Velocity: A simple Python history benchmarking tool. DragonFly port maintained by [email protected]. |
| benchmarks/py-asv-runner | DragonFly | 0.1.0 | benchmarks/py-asv-runner 0.1.0: Core pure python benchmarking for asv. DragonFly port maintained by [email protected]. |
| benchmarks/py-locust | DragonFly | 0.11.0_2 | benchmarks/py-locust 0.11.0_2: Python utility for doing easy, distributed load testing. DragonFly port maintained by [email protected]. |
| benchmarks/py-naarad | DragonFly | 1.0.15_6 | benchmarks/py-naarad 1.0.15_6: Framework for performance analysis. DragonFly port maintained by [email protected]. |
| benchmarks/py-throughpy | DragonFly | 0.1_1 | benchmarks/py-throughpy 0.1_1: Python script to test throughput with iperf3. DragonFly port maintained by [email protected]. |
| benchmarks/py-zopkio | DragonFly | 0.2.5_9 | benchmarks/py-zopkio 0.2.5_9: Functional and Performance Test Framework. DragonFly port maintained by [email protected]. |
| benchmarks/raidtest | DragonFly | 1.3 | benchmarks/raidtest 1.3: Test performance of storage devices. DragonFly port maintained by [email protected]. |
| benchmarks/randomio | DragonFly | 1.4 | benchmarks/randomio 1.4: Multithreaded disk i/o microbenchmark. DragonFly port maintained by [email protected]. |
| benchmarks/rubygem-benchmark | DragonFly | 0.4.0 | benchmarks/rubygem-benchmark 0.4.0: Performance benchmarking library. DragonFly port maintained by [email protected]. |
| benchmarks/rubygem-benchmark-ips | DragonFly | 2.14.0 | benchmarks/rubygem-benchmark-ips 2.14.0: Iterations per second enhancement to Benchmark. DragonFly port maintained by [email protected]. |
| benchmarks/rubygem-benchmark-memory | DragonFly | 0.2.0 | benchmarks/rubygem-benchmark-memory 0.2.0: Benchmark-style memory profiling for Ruby 2.1+. DragonFly port maintained by [email protected]. |
| benchmarks/rubygem-railsbench | DragonFly | 0.9.8_1 | benchmarks/rubygem-railsbench 0.9.8_1: Scripts designed for benchmarking of Rails applications. DragonFly port maintained by [email protected]. |
| benchmarks/scimark2 | DragonFly | 2.0_2 | benchmarks/scimark2 2.0_2: Java benchmark for scientific and numerical computing. DragonFly port maintained by [email protected]. |
| benchmarks/scimark2c | DragonFly | 2.1 | benchmarks/scimark2c 2.1: ANSI C version of the SciMark2 benchmark. DragonFly port maintained by [email protected]. |
| benchmarks/scimark4c | DragonFly | 4 | benchmarks/scimark4c 4: ANSI C version of the SciMark2 benchmark. DragonFly port maintained by [email protected]. |
| benchmarks/shellbench | DragonFly | 20200806 | benchmarks/shellbench 20200806: Benchmark utility for POSIX shell comparison. DragonFly port maintained by [email protected]. |
| benchmarks/sipp | DragonFly | 3.5.1_7 | benchmarks/sipp 3.5.1_7: SIP benchmarking and testing tool. DragonFly port maintained by [email protected]. |
| benchmarks/slowloris | DragonFly | 0.7_2 | benchmarks/slowloris 0.7_2: Low-bandwidth, yet greedy and poisonous HTTP client. DragonFly port maintained by [email protected]. |
| benchmarks/smhasher | DragonFly | 1.0_1 | benchmarks/smhasher 1.0_1: Hash Algorithm Benchmarking. DragonFly port maintained by [email protected]. |
| benchmarks/spp | DragonFly | 0.4.2 | benchmarks/spp 0.4.2: Calculates round trip time from pcap files or live capture. DragonFly port maintained by [email protected]. |
| benchmarks/stream | DragonFly | 5.10 | benchmarks/stream 5.10: Synthetic benchmark program that measures sustainable memory bandwidth. DragonFly port maintained by [email protected]. |
| benchmarks/sysbench | DragonFly | 1.0.20_1 | benchmarks/sysbench 1.0.20_1: Scriptable database and system performance benchmark. DragonFly port maintained by [email protected]. |
| benchmarks/tcpblast | DragonFly | 1.1_1 | benchmarks/tcpblast 1.1_1: Measures the throughput of a TCP connection. DragonFly port maintained by [email protected]. |
| benchmarks/thrulay | DragonFly | 0.9_2 | benchmarks/thrulay 0.9_2: Network capacity tester. DragonFly port maintained by [email protected]. |
| benchmarks/tinymembench | DragonFly | 0.4 | benchmarks/tinymembench 0.4: Simple benchmark for memory throughput and latency. DragonFly port maintained by [email protected]. |
| benchmarks/tsung | DragonFly | 1.8.0_1 | benchmarks/tsung 1.8.0_1: Multi-protocol distributed load testing tool. DragonFly port maintained by [email protected]. |
| benchmarks/ttcp | DragonFly | 1.13 | benchmarks/ttcp 1.13: Benchmarking tool for analysing TCP and UDP performance. DragonFly port maintained by [email protected]. |
| benchmarks/typometer | DragonFly | 1.0.1 | benchmarks/typometer 1.0.1: Text/code editor typing latency analyzer. DragonFly port maintained by [email protected]. |
| benchmarks/ubench | DragonFly | 0.32_1 | benchmarks/ubench 0.32_1: Unix Benchmark Utility for CPU(s) and memory. DragonFly port maintained by [email protected]. |
| benchmarks/unixbench | DragonFly | 5.1.3.51_2 | benchmarks/unixbench 5.1.3.51_2: BYTE magazine's Public Domain benchmark for UNIX. DragonFly port maintained by [email protected]. |
| benchmarks/uperf | DragonFly | 1.0.7,1 | benchmarks/uperf 1.0.7,1: Network performance tool to model and replay of networking patterns. DragonFly port maintained by [email protected]. |
| benchmarks/vegeta | DragonFly | 12.11.0_10 | benchmarks/vegeta 12.11.0_10: HTTP load testing tool and library. DragonFly port maintained by [email protected]. |
| benchmarks/vkmark | DragonFly | 2025.01 | benchmarks/vkmark 2025.01: Vulkan benchmark. DragonFly port maintained by [email protected]. |
| benchmarks/vkoverhead | DragonFly | 1.3 | benchmarks/vkoverhead 1.3: Evaluate CPU overhead of Vulkan drivers. DragonFly port maintained by [email protected]. |
| benchmarks/vkpeak | DragonFly | 20240505 | benchmarks/vkpeak 20240505: Profile Vulkan devices to find their peak capacities. DragonFly port maintained by [email protected]. |
| benchmarks/webbench | DragonFly | 1.5_1 | benchmarks/webbench 1.5_1: Simple forking web benchmark. DragonFly port maintained by [email protected]. |
| benchmarks/wrk | DragonFly | 4.2.0 | benchmarks/wrk 4.2.0: Modern HTTP benchmarking tool. DragonFly port maintained by [email protected]. |
| biology/R-cran-Biobase | DragonFly | 2.62.0 | biology/R-cran-Biobase 2.62.0: Base functions for Bioconductor. DragonFly port maintained by [email protected]. |
| biology/R-cran-BiocGenerics | DragonFly | 0.48.1 | biology/R-cran-BiocGenerics 0.48.1: S4 generic functions used in Bioconductor. DragonFly port maintained by [email protected]. |
| biology/R-cran-BiocManager | DragonFly | 1.30.25 | biology/R-cran-BiocManager 1.30.25: Convenient tool to install and update Bioconductor packages. DragonFly port maintained by [email protected]. |
| biology/ad2vcf | DragonFly | 0.1.6.19 | biology/ad2vcf 0.1.6.19: Add allelic depth info from a SAM stream to a VCF file. DragonFly port maintained by [email protected]. |
| biology/artemis | DragonFly | 17.0.1.11 | biology/artemis 17.0.1.11: DNA sequence viewer and annotation tool. DragonFly port maintained by [email protected]. |
| biology/babel | DragonFly | 1.6_4 | biology/babel 1.6_4: Converts among various molecular file formats. DragonFly port maintained by [email protected]. |
| biology/bamtools | DragonFly | 2.5.2_2 | biology/bamtools 2.5.2_2: API and toolkit for handling BAM files. DragonFly port maintained by [email protected]. |
| biology/bamutil | DragonFly | 1.0.15 | biology/bamutil 1.0.15: Utilities for working with SAM/BAM files. DragonFly port maintained by [email protected]. |
| biology/barrnap | DragonFly | 0.9 | biology/barrnap 0.9: BAsic Rapid Ribosomal RNA Predictor. DragonFly port maintained by [email protected]. |
| biology/bbmap | DragonFly | 39.15 | biology/bbmap 39.15: BBMap short read aligner, and other bioinformatic tools. DragonFly port maintained by [email protected]. |
| biology/bcf-score | DragonFly | 1.20_1 | biology/bcf-score 1.20_1: Bcftools plugins for GWAS-VCF summary statistics files. DragonFly port maintained by [email protected]. |
| biology/bcftools | DragonFly | 1.21 | biology/bcftools 1.21: Tools for manipulating next-generation sequencing data. DragonFly port maintained by [email protected]. |
| biology/bedtools | DragonFly | 2.31.1 | biology/bedtools 2.31.1: Toolset for genome set arithmetic such as intersect, union. DragonFly port maintained by [email protected]. |
| biology/bfc | DragonFly | g20150417 | biology/bfc g20150417: Correct sequencing errors from Illumina sequencing data. DragonFly port maintained by [email protected]. |
| biology/bio-mocha | DragonFly | 1.20 | biology/bio-mocha 1.20: Bcftools plugin for mosaic chromosomal alteration analysis. DragonFly port maintained by [email protected]. |
| biology/bioawk | DragonFly | 1.0.7 | biology/bioawk 1.0.7: BWK awk modified for biological data. DragonFly port maintained by [email protected]. |
| biology/biolibc | DragonFly | 0.2.6.4 | biology/biolibc 0.2.6.4: Low-level high-performance bioinformatics library. DragonFly port maintained by [email protected]. |
| biology/biolibc-tools | DragonFly | 0.1.4.13_1 | biology/biolibc-tools 0.1.4.13_1: High-performance bioinformatics tools based on biolibc. DragonFly port maintained by [email protected]. |
| biology/bioparser | DragonFly | 3.1.0 | biology/bioparser 3.1.0: C++ header-only parsing library for several formats in bioinformatics. DragonFly port maintained by [email protected]. |
| biology/biosig | DragonFly | 2.6.1_1 | biology/biosig 2.6.1_1: Library for reading and writing different biosignal data format. DragonFly port maintained by [email protected]. |
| biology/biosoup | DragonFly | 0.11.0_1 | biology/biosoup 0.11.0_1: Collection of C++ header-only data structures for bioinformatics. DragonFly port maintained by [email protected]. |
| biology/bolt-lmm | DragonFly | 2.3.6_15 | biology/bolt-lmm 2.3.6_15: Mixed model association testing and variance component analysis. DragonFly port maintained by [email protected]. |
| biology/bowtie | DragonFly | 1.3.1 | biology/bowtie 1.3.1: Ultrafast, memory-efficient short read aligner. DragonFly port maintained by [email protected]. |
| biology/bowtie2 | DragonFly | 2.5.4 | biology/bowtie2 2.5.4: Ultrafast, memory-efficient short read aligner. DragonFly port maintained by [email protected]. |
| biology/bwa | DragonFly | 0.7.19 | biology/bwa 0.7.19: Burrows-Wheeler sequence aligner. DragonFly port maintained by [email protected]. |
| biology/canu | DragonFly | 2.2_6 | biology/canu 2.2_6: Single molecule sequence assembler. DragonFly port maintained by [email protected]. |
| biology/cd-hit | DragonFly | 4.8.1_3 | biology/cd-hit 4.8.1_3: Clustering and comparing protein or nucleotide sequences. DragonFly port maintained by [email protected]. |
| biology/cdbfasta | DragonFly | 2023.07.10 | biology/cdbfasta 2023.07.10: Fast indexing and retrieval of FASTA records from flat file databases. DragonFly port maintained by [email protected]. |
| biology/checkm | DragonFly | 1.2.3_1 | biology/checkm 1.2.3_1: Quality assessment tool for the microbial genomes. DragonFly port maintained by [email protected]. |
| biology/clustal-omega | DragonFly | 1.2.4 | biology/clustal-omega 1.2.4: Multiple alignment of nucleic acid and protein, replaces clustalw. DragonFly port maintained by [email protected]. |
| biology/clustalw | DragonFly | 2.1_3 | biology/clustalw 2.1_3: Multiple alignment program for DNA or proteins. DragonFly port maintained by [email protected]. |
| biology/cufflinks | DragonFly | 2.2.1.89_11 | biology/cufflinks 2.2.1.89_11: Cufflinks assembles transcripts, estimates their abundance, etc. DragonFly port maintained by [email protected]. |
| biology/diamond | DragonFly | 2.1.9 | biology/diamond 2.1.9: BLAST-compatible local sequence aligner. DragonFly port maintained by [email protected]. |
| biology/dsr-pdb | DragonFly | 1.0.3_15 | biology/dsr-pdb 1.0.3_15: Simple C++ PDB reader (reads the protein description format). DragonFly port maintained by [email protected]. |
| biology/edlib | DragonFly | 1.2.7 | biology/edlib 1.2.7: Fast C++ library for sequence alignment using edit distance. DragonFly port maintained by [email protected]. |
| biology/emboss | DragonFly | 6.6.0_7 | biology/emboss 6.6.0_7: Collection of open source tools for genetic sequence analysis. DragonFly port maintained by [email protected]. |
| biology/erminej | DragonFly | 3.2 | biology/erminej 3.2: Analyses of gene sets such as gene expression profiling studies. DragonFly port maintained by [email protected]. |
| biology/exonerate | DragonFly | 2.4.0_1 | biology/exonerate 2.4.0_1: Generic tool for sequence alignment. DragonFly port maintained by [email protected]. |
| biology/fasda | DragonFly | 0.1.5_1 | biology/fasda 0.1.5_1: Fast and simple differential analysis. DragonFly port maintained by [email protected]. |
| biology/fasta | DragonFly | 21.1.1_1 | biology/fasta 21.1.1_1: Collection of programs for searching DNA and protein databases. DragonFly port maintained by [email protected]. |
| biology/fasta3 | DragonFly | 36.3.8_1 | biology/fasta3 36.3.8_1: Collection of programs for searching DNA and protein databases. DragonFly port maintained by [email protected]. |
| biology/fastahack | DragonFly | 1.0.0 | biology/fastahack 1.0.0: Utility for indexing and sequence extraction from FASTA files. DragonFly port maintained by [email protected]. |
| biology/fastdnaml | DragonFly | 1.2.2_2 | biology/fastdnaml 1.2.2_2: Faster DNAML, makes phylogenetic trees using maximum likelihood. DragonFly port maintained by [email protected]. |
| biology/fastool | DragonFly | 0.1.4 | biology/fastool 0.1.4: Simple and quick FastQ and FastA tool for file reading and conversion. DragonFly port maintained by [email protected]. |
| biology/fastp | DragonFly | 0.23.4 | biology/fastp 0.23.4: Ultra-fast all-in-one FASTQ preprocessor. DragonFly port maintained by [email protected]. |
| biology/fastqc | DragonFly | 0.12.1 | biology/fastqc 0.12.1: Quality control tool for high throughput sequence data. DragonFly port maintained by [email protected]. |
| biology/fasttree | DragonFly | 2.1.11 | biology/fasttree 2.1.11: Approximately-maximum-likelihood phylogenetic trees from alignments. DragonFly port maintained by [email protected]. |
| biology/fastx-toolkit | DragonFly | 0.0.14_1 | biology/fastx-toolkit 0.0.14_1: CLI tools for Short-Reads FASTA/FASTQ files preprocessing. DragonFly port maintained by [email protected]. |
| biology/fermi-lite | DragonFly | 0.1.13_1 | biology/fermi-lite 0.1.13_1: Library and tool for assembling Illumina short reads in small regions. DragonFly port maintained by [email protected]. |
| biology/figtree | DragonFly | 1.4.4.14 | biology/figtree 1.4.4.14: Graphical viewer of phylogenetic trees. DragonFly port maintained by [email protected]. |
| biology/flash | DragonFly | 1.2.11 | biology/flash 1.2.11: Fast Length Adjustment of SHort reads. DragonFly port maintained by [email protected]. |
| biology/fluctuate | DragonFly | 1.40 | biology/fluctuate 1.40: Program to fit population models. DragonFly port maintained by [email protected]. |
| biology/freebayes | DragonFly | 1.3.6_2 | biology/freebayes 1.3.6_2: Bayesian haplotype-based polymorphism discovery and genotyping. DragonFly port maintained by [email protected]. |
| biology/garlic | DragonFly | 1.6_1 | biology/garlic 1.6_1: Molecular viewer, editor, and visualization program. DragonFly port maintained by [email protected]. |
| biology/gemma | DragonFly | 0.98.5_1 | biology/gemma 0.98.5_1: Genome-wide Efficient Mixed Model Association. DragonFly port maintained by [email protected]. |
| biology/gff2ps | DragonFly | 0.98l | biology/gff2ps 0.98l: Convert gff-formatted genomic data sets to PostScript. DragonFly port maintained by [email protected]. |
| biology/gffread | DragonFly | 0.12.7 | biology/gffread 0.12.7: GFF/GTF format conversions, filtering, FASTA extraction, etc. DragonFly port maintained by [email protected]. |
| biology/gmap | DragonFly | 2020.09.12 | biology/gmap 2020.09.12: Genomic Mapping and Alignment Program for mRNA and EST Sequences. DragonFly port maintained by [email protected]. |
| biology/gperiodic | DragonFly | 3.0.3_1 | biology/gperiodic 3.0.3_1: Displays a periodic table of the elements. DragonFly port maintained by [email protected]. |
| biology/graphlan | DragonFly | 1.1.3_1 | biology/graphlan 1.1.3_1: High-quality circular representations of taxonomic, phylogenetic trees. DragonFly port maintained by [email protected]. |
| biology/hisat2 | DragonFly | 2.2.1_2 | biology/hisat2 2.2.1_2: Alignment program for mapping next-generation sequencing reads. DragonFly port maintained by [email protected]. |
| biology/hmmer | DragonFly | 3.4 | biology/hmmer 3.4: Profile hidden Markov models for biological sequence analysis. DragonFly port maintained by [email protected]. |
| biology/htslib | DragonFly | 1.21 | biology/htslib 1.21: C library for high-throughput sequencing data formats. DragonFly port maintained by [email protected]. |
BSD Ports