| biology/py-dnaio | NetBSD | 1.2.0nb1 | biology/py-dnaio 1.2.0nb1: Read and write FASTQ and FASTA files. NetBSD port maintained by [email protected]. |
| biology/py-macs2 | NetBSD | 2.2.9.1nb3 | biology/py-macs2 2.2.9.1nb3: Algorithm for identifying transcription factor binding sites. NetBSD port maintained by [email protected]. |
| biology/py-macs3 | NetBSD | 3.0.2nb2 | biology/py-macs3 3.0.2nb2: Peak caller aimed at transcription factor binding sites. NetBSD port maintained by [email protected]. |
| biology/py-multiqc | NetBSD | 1.25.2nb1 | biology/py-multiqc 1.25.2nb1: Aggregate bioinformatics analysis reports across samples and tools. NetBSD port maintained by [email protected]. |
| biology/py-pydicom | NetBSD | 3.0.2 | biology/py-pydicom 3.0.2: Pure python package for working with DICOM files. NetBSD port maintained by [email protected]. |
| biology/racon | NetBSD | 1.4.3 | biology/racon 1.4.3: Genomic consensus builder. NetBSD port maintained by [email protected]. |
| biology/rasmol | NetBSD | 2.7.3nb2 | biology/rasmol 2.7.3nb2: Molecular Graphics Visualisation Tool. NetBSD port maintained by [email protected]. |
| biology/rna-seq | NetBSD | 1.3.0 | biology/rna-seq 1.3.0: Core tools needed for RNA-Seq analysis. NetBSD port maintained by [email protected]. |
| biology/rna-star | NetBSD | 2.7.10b | biology/rna-star 2.7.10b: Spliced Transcripts Alignment to a Reference. NetBSD port maintained by [email protected]. |
| biology/samtools | NetBSD | 1.21 | biology/samtools 1.21: Tools for manipulating sequence alignment maps. NetBSD port maintained by [email protected]. |
| biology/seqtk | NetBSD | 1.4 | biology/seqtk 1.4: Tool for processing sequences in FASTA/FASTQ format. NetBSD port maintained by [email protected]. |
| biology/sewer | NetBSD | 2.6nb2 | biology/sewer 2.6nb2: SEquence Analysis using WEb Resources. NetBSD port maintained by [email protected]. |
| biology/sra-tools | NetBSD | 3.2.0nb2 | biology/sra-tools 3.2.0nb2: NCBI's toolkit for handling data in INSDC Sequence Read Archives. NetBSD port maintained by [email protected]. |
| biology/stacks | NetBSD | 2.68 | biology/stacks 2.68: Software pipeline for building loci from short-read sequences. NetBSD port maintained by [email protected]. |
| biology/stride | NetBSD | 20030804 | biology/stride 20030804: Protein secondary structure assignment from atomic coordinates. NetBSD port maintained by [email protected]. |
| biology/stringtie | NetBSD | 2.1.1 | biology/stringtie 2.1.1: Transcript assembly and quantification for RNA-seq. NetBSD port maintained by [email protected]. |
| biology/trimmomatic | NetBSD | 0.38 | biology/trimmomatic 0.38: Flexible read trimming tool for Illumina NGS data. NetBSD port maintained by [email protected]. |
| biology/vcf-split | NetBSD | 0.1.5.19 | biology/vcf-split 0.1.5.19: Split a multi-sample VCF into single-sample VCFs. NetBSD port maintained by [email protected]. |
| biology/vcf2hap | NetBSD | 0.1.6.14 | biology/vcf2hap 0.1.6.14: Generate .hap file from VCF for haplohseq. NetBSD port maintained by [email protected]. |
| biology/vsearch | NetBSD | 2.29.4 | biology/vsearch 2.29.4: Versatile open-source tool for metagenomics. NetBSD port maintained by [email protected]. |
| biology/xmakemol | NetBSD | 5.16h | biology/xmakemol 5.16h: Program for visualizing atomic and molecular systems. NetBSD port maintained by [email protected]. |
| biology/xylem | NetBSD | 1.8.7 | biology/xylem 1.8.7: Tools for manipulation of genetic databases. NetBSD port maintained by [email protected]. |
| cad/MyHDL-gplcver | NetBSD | 0.11 | cad/MyHDL-gplcver 0.11: GPL Cver cosimulation support for py-MyHDL. NetBSD port maintained by [email protected]. |
| cad/MyHDL-iverilog | NetBSD | 0.11 | cad/MyHDL-iverilog 0.11: Icarus Verilog cosimulation support for py-MyHDL. NetBSD port maintained by [email protected]. |
| cad/adms | NetBSD | 2.2.5nb8 | cad/adms 2.2.5nb8: Compact device model code generator for SPICE. NetBSD port maintained by [email protected]. |
| cad/atlc | NetBSD | 4.6.0nb1 | cad/atlc 4.6.0nb1: Calculates the impedance of arbitrary cross section transmission lines. NetBSD port maintained by [email protected]. |
| cad/cascade | NetBSD | 1.4nb1 | cad/cascade 1.4nb1: Simple tool to analyze noise and distortion of a RF system. NetBSD port maintained by [email protected]. |
| cad/cgi-wcalc | NetBSD | 1.0nb2 | cad/cgi-wcalc 1.0nb2: CGI Based Transmission Line Analysis/Synthesis Calculator. NetBSD port. |
| cad/covered | NetBSD | 0.7.10nb4 | cad/covered 0.7.10nb4: Verilog code coverage analyzer (stable release version). NetBSD port maintained by [email protected]. |
| cad/dinotrace | NetBSD | 9.4fnb2 | cad/dinotrace 9.4fnb2: Tool for viewing the output of digital simulators. NetBSD port maintained by [email protected]. |
| cad/diylc | NetBSD | 3.28.0nb1 | cad/diylc 3.28.0nb1: Simple electronic schematics CAD tool. NetBSD port maintained by [email protected]. |
| cad/electric | NetBSD | 7.00nb4 | cad/electric 7.00nb4: Electrical CAD system. NetBSD port maintained by [email protected]. |
| cad/fastcap | NetBSD | 2.0.19920918nb4 | cad/fastcap 2.0.19920918nb4: Fast 3-D capacitance solver. NetBSD port maintained by [email protected]. |
| cad/fasthenry | NetBSD | 3.0.19961112 | cad/fasthenry 3.0.19961112: Three-dimensional inductance extraction program. NetBSD port maintained by [email protected]. |
| cad/felt | NetBSD | 3.05nb5 | cad/felt 3.05nb5: Free system for introductory level finite element analysis. NetBSD port maintained by [email protected]. |
| cad/freehdl | NetBSD | 0.0.7nb10 | cad/freehdl 0.0.7nb10: VHDL simulator. NetBSD port maintained by [email protected]. |
| cad/fstl | NetBSD | 0.11.1nb3 | cad/fstl 0.11.1nb3: Fast STL file viewer. NetBSD port maintained by [email protected]. |
| cad/gcad3d | NetBSD | 2.46.24nb15 | cad/gcad3d 2.46.24nb15: 3D CADCAM software. NetBSD port maintained by [email protected]. |
| cad/gdsreader | NetBSD | 0.3.2 | cad/gdsreader 0.3.2: GDS-II stream file to Postscript and HP/GL converter. NetBSD port maintained by [email protected]. |
| cad/geda | NetBSD | 1.8.2nb51 | cad/geda 1.8.2nb51: Toolset for automating electronic design. NetBSD port. |
| cad/gerbv | NetBSD | 2.6.2nb23 | cad/gerbv 2.6.2nb23: Gerber file viewer. NetBSD port maintained by [email protected]. |
| cad/ghdl | NetBSD | 6.0.0 | cad/ghdl 6.0.0: Open-source simulator/compiler/analyzer for the VHDL. NetBSD port maintained by [email protected]. |
| cad/gnetman | NetBSD | 20050211nb10 | cad/gnetman 20050211nb10: Advanced Netlister and Netlist Manipulation Database for gEDA. NetBSD port maintained by [email protected]. |
| cad/gnucap | NetBSD | 20060708nb4 | cad/gnucap 20060708nb4: General purpose circuit simulator. NetBSD port maintained by [email protected]. |
| cad/gplcver | NetBSD | 2.12a | cad/gplcver 2.12a: Verilog simulator. NetBSD port maintained by [email protected]. |
| cad/gsmc | NetBSD | 1.1nb51 | cad/gsmc 1.1nb51: Smith charting program. NetBSD port maintained by [email protected]. |
| cad/gtk1-wcalc | NetBSD | 1.0nb2 | cad/gtk1-wcalc 1.0nb2: GTK Based Transmission Line Analysis/Synthesis Calculator. NetBSD port. |
| cad/gtk2-wcalc | NetBSD | 1.0nb50 | cad/gtk2-wcalc 1.0nb50: GTK2 Based Transmission Line Analysis/Synthesis Calculator. NetBSD port. |
| cad/gtkwave | NetBSD | 3.3.125nb5 | cad/gtkwave 3.3.125nb5: Electronic waveform viewer. NetBSD port maintained by [email protected]. |
| cad/iverilog | NetBSD | 12.0 | cad/iverilog 12.0: Verilog simulation and synthesis tool (stable release version). NetBSD port maintained by [email protected]. |
| cad/kicad | NetBSD | 8.0.9nb8 | cad/kicad 8.0.9nb8: Schematic and PCB CAD software (stable branch). NetBSD port maintained by [email protected]. |
| cad/kicad-footprints | NetBSD | 8.0.6 | cad/kicad-footprints 8.0.6: Component footprints for the PCB CAD software. NetBSD port maintained by [email protected]. |
| cad/kicad-packages3d | NetBSD | 8.0.6 | cad/kicad-packages3d 8.0.6: 3D models for rendering and the MCAD software. NetBSD port maintained by [email protected]. |
| cad/kicad-symbols | NetBSD | 8.0.6 | cad/kicad-symbols 8.0.6: Schematic symbol libraries for the schematic CAD software. NetBSD port maintained by [email protected]. |
| cad/kicad-templates | NetBSD | 8.0.6 | cad/kicad-templates 8.0.6: Project templates for the schematic CAD software. NetBSD port maintained by [email protected]. |
| cad/klayout | NetBSD | 0.30.10nb1 | cad/klayout 0.30.10nb1: Simple GDS and OASIS file viewer and Editor. NetBSD port maintained by [email protected]. |
| cad/librecad | NetBSD | 2.2.0.2nb8 | cad/librecad 2.2.0.2nb8: Free Open Source personal CAD application. NetBSD port maintained by [email protected]. |
| cad/libredwg | NetBSD | 0.12.4nb13 | cad/libredwg 0.12.4nb13: Free library to read/write DWG files. NetBSD port maintained by [email protected]. |
| cad/libwcalc | NetBSD | 1.0nb2 | cad/libwcalc 1.0nb2: Library for Transmission Line Analysis/Synthesis. NetBSD port. |
| cad/magic | NetBSD | 7.5.188nb11 | cad/magic 7.5.188nb11: Integrated circuit layout system. NetBSD port maintained by [email protected]. |
| cad/mcalc | NetBSD | 1.6 | cad/mcalc 1.6: JavaScript based microstrip analysis/synthesis calculator. NetBSD port maintained by [email protected]. |
| cad/mpac | NetBSD | 0.2.2nb2 | cad/mpac 0.2.2nb2: Microstrip Patch Antenna Calculator. NetBSD port maintained by [email protected]. |
| cad/nelma | NetBSD | 3.2nb3 | cad/nelma 3.2nb3: Circuit board capacitance extraction tool. NetBSD port maintained by [email protected]. |
| cad/ng-spice | NetBSD | 40nb1 | cad/ng-spice 40nb1: Next generation circuit simulation program. NetBSD port. |
| cad/ng-spice-shared | NetBSD | 40 | cad/ng-spice-shared 40: Next generation circuit simulation program (shared libraries). NetBSD port. |
| cad/ntesla | NetBSD | 1.7 | cad/ntesla 1.7: Tesla coil design program. NetBSD port maintained by [email protected]. |
| cad/nvc | NetBSD | 1.18.2nb1 | cad/nvc 1.18.2nb1: VHDL compiler and simulator implementing IEEE 1076-2008. NetBSD port maintained by [email protected]. |
| cad/occt | NetBSD | 7.8.0nb1 | cad/occt 7.8.0nb1: Boundary Representation modeling toolkit and 3D geometry library. NetBSD port maintained by [email protected]. |
| cad/openscad | NetBSD | 2021.01nb46 | cad/openscad 2021.01nb46: OpenSCAD - The Programmers Solid 3D CAD Modeller. NetBSD port maintained by [email protected]. |
| cad/p5-gds2 | NetBSD | 3.35nb9 | cad/p5-gds2 3.35nb9: Modules to read, write, and manipulate GDS2 (GDSII) stream files. NetBSD port maintained by [email protected]. |
| cad/pcb | NetBSD | 4.1.3nb22 | cad/pcb 4.1.3nb22: Printed circuit board layout system. NetBSD port maintained by [email protected]. |
| cad/py-MyHDL | NetBSD | 0.11nb1 | cad/py-MyHDL 0.11nb1: Hardware description in Python. NetBSD port maintained by [email protected]. |
| cad/py-PyRTL | NetBSD | 1.0.3 | cad/py-PyRTL 1.0.3: Register-transfer-level hardware design and simulation. NetBSD port maintained by [email protected]. |
| cad/py-gds | NetBSD | 1.6.13nb1 | cad/py-gds 1.6.13nb1: Python module for creating GDSII stream files. NetBSD port maintained by [email protected]. |
| cad/py-gdstk | NetBSD | 0.9.61 | cad/py-gdstk 0.9.61: C++/Python library for GDSII and OASIS files. NetBSD port maintained by [email protected]. |
| cad/py-simpy | NetBSD | 4.1.2 | cad/py-simpy 4.1.2: Discrete event simulation framework. NetBSD port maintained by [email protected]. |
| cad/qcad | NetBSD | 3.32.3.4nb5 | cad/qcad 3.32.3.4nb5: 2D CAD system. NetBSD port maintained by [email protected]. |
| cad/qcad-partlibrary | NetBSD | 20160819 | cad/qcad-partlibrary 20160819: Parts libraries for the QCad 2D CAD system. NetBSD port maintained by [email protected]. |
| cad/qucs-s | NetBSD | 25.2.0nb3 | cad/qucs-s 25.2.0nb3: Circuit simulation program based on Qucs circuit simulator. NetBSD port maintained by [email protected]. |
| cad/solvespace | NetBSD | 3.1nb7 | cad/solvespace 3.1nb7: Parametric 2D/3D CAD. NetBSD port maintained by [email protected]. |
| cad/spice | NetBSD | 3f5.1nb6 | cad/spice 3f5.1nb6: General-purpose circuit simulation program. NetBSD port maintained by [email protected]. |
| cad/spiceprm | NetBSD | 0.11nb10 | cad/spiceprm 0.11nb10: Spice preprocessor for parameterized subcircuits. NetBSD port maintained by [email protected]. |
| cad/stdio-wcalc | NetBSD | 1.0nb2 | cad/stdio-wcalc 1.0nb2: Stdio Based Transmission Line Analysis/Synthesis Calculator. NetBSD port. |
| cad/tkgate | NetBSD | 1.8.7nb4 | cad/tkgate 1.8.7nb4: Tcl/Tk based digital circuit editor and simulator. NetBSD port maintained by [email protected]. |
| cad/tnt-mmtl | NetBSD | 1.2.2nb18 | cad/tnt-mmtl 1.2.2nb18: Multilayer Multiconductor Transmission Line 2-D and 2.5-D simulator. NetBSD port maintained by [email protected]. |
| cad/transcalc | NetBSD | 0.14nb51 | cad/transcalc 0.14nb51: Transmission line analysis/synthesis. NetBSD port maintained by [email protected]. |
| cad/verilator | NetBSD | 5.042 | cad/verilator 5.042: Verilog HDL simulator. NetBSD port maintained by [email protected]. |
| cad/verilog-mode | NetBSD | 3.60nb4 | cad/verilog-mode 3.60nb4: Verilog mode for Emacs. NetBSD port maintained by [email protected]. |
| cad/veriwell | NetBSD | 2.8.7 | cad/veriwell 2.8.7: Verilog Simulator. NetBSD port maintained by [email protected]. |
| cad/wcalc-docs | NetBSD | 1.0nb2 | cad/wcalc-docs 1.0nb2: Web Pages for the Wcalc Transmission Line Calculator. NetBSD port. |
| cad/xchiplogo | NetBSD | 19991222nb14 | cad/xchiplogo 19991222nb14: Program for generating pretty logos on VLSI chips. NetBSD port maintained by [email protected]. |
| cad/xcircuit | NetBSD | 3.10.30nb7 | cad/xcircuit 3.10.30nb7: Drawing program for X11 (especially for circuits). NetBSD port maintained by [email protected]. |
| chat/anope | NetBSD | 2.0.18nb3 | chat/anope 2.0.18nb3: Modular set of IRC services. NetBSD port maintained by [email protected]. |
| chat/atheme | NetBSD | 7.2.12nb1 | chat/atheme 7.2.12nb1: Flexible IRC services system with proven scalability. NetBSD port maintained by [email protected]. |
| chat/bitchbot | NetBSD | 1.0.2nb10 | chat/bitchbot 1.0.2nb10: Bitchbot is a perl-based IRC bot. NetBSD port maintained by [email protected]. |
| chat/bitchx | NetBSD | 1.2.1nb7 | chat/bitchx 1.2.1nb7: IRC client based on ircII. NetBSD port maintained by [email protected]. |
| chat/bitlbee | NetBSD | 3.6nb25 | chat/bitlbee 3.6nb25: IRC to other chat networks gateway. NetBSD port maintained by [email protected]. |
| chat/bitlbee-discord | NetBSD | 0.4.3nb3 | chat/bitlbee-discord 0.4.3nb3: Discord protocol plugin for BitlBee. NetBSD port maintained by [email protected]. |
| chat/bitlbee-facebook | NetBSD | 1.2.2nb3 | chat/bitlbee-facebook 1.2.2nb3: Facebook protocol plugin for BitlBee. NetBSD port maintained by [email protected]. |
| chat/bitlbee-mastodon | NetBSD | 1.4.5nb3 | chat/bitlbee-mastodon 1.4.5nb3: Mastodon protocol plugin for BitlBee. NetBSD port maintained by [email protected]. |
BSD Ports