| benchmarks/postal | FreeBSD | 0.76_1 | benchmarks/postal 0.76_1: Benchmark SMTP/POP servers. FreeBSD port maintained by [email protected]. |
| benchmarks/postmark | FreeBSD | 1.53_1 | benchmarks/postmark 1.53_1: NetApps file system benchmark. FreeBSD port maintained by [email protected]. |
| benchmarks/py-asv | FreeBSD | 0.6.5_1 | benchmarks/py-asv 0.6.5_1: Airspeed Velocity: A simple Python history benchmarking tool. FreeBSD port maintained by [email protected]. |
| benchmarks/py-asv-runner | FreeBSD | 0.2.1 | benchmarks/py-asv-runner 0.2.1: Core pure python benchmarking for asv. FreeBSD port maintained by [email protected]. |
| benchmarks/py-locust | FreeBSD | 2.37.10_3 | benchmarks/py-locust 2.37.10_3: Python utility for doing easy, distributed load testing. FreeBSD port maintained by [email protected]. |
| benchmarks/py-locust-cloud | FreeBSD | 1.28.1 | benchmarks/py-locust-cloud 1.28.1: Hosted version of Locust that allows you to run distributed load tests. FreeBSD port maintained by [email protected]. |
| benchmarks/py-reframe-hpc | FreeBSD | 4.10.3 | benchmarks/py-reframe-hpc 4.10.3: HPC regression/benchmark testing framework. FreeBSD port maintained by [email protected]. |
| benchmarks/py-throughpy | FreeBSD | 0.1_1 | benchmarks/py-throughpy 0.1_1: Python script to test throughput with iperf3. FreeBSD port maintained by [email protected]. |
| benchmarks/raidtest | FreeBSD | 1.3 | benchmarks/raidtest 1.3: Test performance of storage devices. FreeBSD port maintained by [email protected]. |
| benchmarks/randomio | FreeBSD | 1.4 | benchmarks/randomio 1.4: Multithreaded disk i/o microbenchmark. FreeBSD port maintained by [email protected]. |
| benchmarks/rubygem-benchmark | FreeBSD | 0.5.0 | benchmarks/rubygem-benchmark 0.5.0: Performance benchmarking library. FreeBSD port maintained by [email protected]. |
| benchmarks/rubygem-benchmark-ips | FreeBSD | 2.15.1 | benchmarks/rubygem-benchmark-ips 2.15.1: Iterations per second enhancement to Benchmark. FreeBSD port maintained by [email protected]. |
| benchmarks/rubygem-benchmark-memory | FreeBSD | 0.2.0 | benchmarks/rubygem-benchmark-memory 0.2.0: Benchmark-style memory profiling for Ruby 2.1+. FreeBSD port maintained by [email protected]. |
| benchmarks/rubygem-derailed_benchmarks | FreeBSD | 2.2.1 | benchmarks/rubygem-derailed_benchmarks 2.2.1: Benchmarks for your whole Rails app. FreeBSD port maintained by [email protected]. |
| benchmarks/rubygem-gitlab-derailed_benchmarks | FreeBSD | 1.6.1_2 | benchmarks/rubygem-gitlab-derailed_benchmarks 1.6.1_2: Benchmarks for your whole Rails app. FreeBSD port maintained by [email protected]. |
| benchmarks/rubygem-railsbench | FreeBSD | 0.9.8_1 | benchmarks/rubygem-railsbench 0.9.8_1: Scripts designed for benchmarking of Rails applications. FreeBSD port maintained by [email protected]. |
| benchmarks/scimark2 | FreeBSD | 2.0_4 | benchmarks/scimark2 2.0_4: Java benchmark for scientific and numerical computing. FreeBSD port maintained by [email protected]. |
| benchmarks/scimark2c | FreeBSD | 2.1 | benchmarks/scimark2c 2.1: ANSI C version of the SciMark2 benchmark. FreeBSD port maintained by [email protected]. |
| benchmarks/scimark4c | FreeBSD | 4 | benchmarks/scimark4c 4: ANSI C version of the SciMark2 benchmark. FreeBSD port maintained by [email protected]. |
| benchmarks/shellbench | FreeBSD | 20200806 | benchmarks/shellbench 20200806: Benchmark utility for POSIX shell comparison. FreeBSD port maintained by [email protected]. |
| benchmarks/siege | FreeBSD | 4.2.0 | benchmarks/siege 4.2.0: HTTP regression testing and benchmarking utility. FreeBSD port maintained by [email protected]. |
| benchmarks/sipp | FreeBSD | 3.5.1_8 | benchmarks/sipp 3.5.1_8: SIP benchmarking and testing tool. FreeBSD port maintained by [email protected]. |
| benchmarks/slowloris | FreeBSD | 0.7_2 | benchmarks/slowloris 0.7_2: Low-bandwidth, yet greedy and poisonous HTTP client. FreeBSD port maintained by [email protected]. |
| benchmarks/smhasher | FreeBSD | 1.0_2 | benchmarks/smhasher 1.0_2: Hash Algorithm Benchmarking. FreeBSD port maintained by [email protected]. |
| benchmarks/spp | FreeBSD | 0.4.2 | benchmarks/spp 0.4.2: Calculates round trip time from pcap files or live capture. FreeBSD port maintained by [email protected]. |
| benchmarks/stream | FreeBSD | 5.10 | benchmarks/stream 5.10: Synthetic benchmark program that measures sustainable memory bandwidth. FreeBSD port maintained by [email protected]. |
| benchmarks/stress-ng | FreeBSD | 0.20.00 | benchmarks/stress-ng 0.20.00: Stress test benchmarks. FreeBSD port maintained by [email protected]. |
| benchmarks/sysbench | FreeBSD | 1.0.20_2 | benchmarks/sysbench 1.0.20_2: Scriptable database and system performance benchmark. FreeBSD port maintained by [email protected]. |
| benchmarks/tcpblast | FreeBSD | 1.1_1 | benchmarks/tcpblast 1.1_1: Measures the throughput of a TCP connection. FreeBSD port maintained by [email protected]. |
| benchmarks/thrulay | FreeBSD | 0.9_2 | benchmarks/thrulay 0.9_2: Network capacity tester. FreeBSD port maintained by [email protected]. |
| benchmarks/tinymembench | FreeBSD | 0.4 | benchmarks/tinymembench 0.4: Simple benchmark for memory throughput and latency. FreeBSD port maintained by [email protected]. |
| benchmarks/tsung | FreeBSD | 1.8.0_1 | benchmarks/tsung 1.8.0_1: Multi-protocol distributed load testing tool. FreeBSD port maintained by [email protected]. |
| benchmarks/ttcp | FreeBSD | 1.13 | benchmarks/ttcp 1.13: Benchmarking tool for analysing TCP and UDP performance. FreeBSD port maintained by [email protected]. |
| benchmarks/typometer | FreeBSD | 1.0.1_2 | benchmarks/typometer 1.0.1_2: Text/code editor typing latency analyzer. FreeBSD port maintained by [email protected]. |
| benchmarks/ubench | FreeBSD | 0.32_1 | benchmarks/ubench 0.32_1: Unix Benchmark Utility for CPU(s) and memory. FreeBSD port maintained by [email protected]. |
| benchmarks/uica | FreeBSD | g20240114+2026.03 | benchmarks/uica g20240114+2026.03: Code Analyzer from the uops.info project. FreeBSD port maintained by [email protected]. |
| benchmarks/unixbench | FreeBSD | 5.1.3.51_2 | benchmarks/unixbench 5.1.3.51_2: BYTE magazine's Public Domain benchmark for UNIX. FreeBSD port maintained by [email protected]. |
| benchmarks/uperf | FreeBSD | 1.0.8,1 | benchmarks/uperf 1.0.8,1: Network performance tool to model and replay of networking patterns. FreeBSD port maintained by [email protected]. |
| benchmarks/vegeta | FreeBSD | 12.12.0_10 | benchmarks/vegeta 12.12.0_10: HTTP load testing tool and library. FreeBSD port maintained by [email protected]. |
| benchmarks/vkmark | FreeBSD | 2025.01_2 | benchmarks/vkmark 2025.01_2: Vulkan benchmark. FreeBSD port maintained by [email protected]. |
| benchmarks/vkoverhead | FreeBSD | 1.3 | benchmarks/vkoverhead 1.3: Evaluate CPU overhead of Vulkan drivers. FreeBSD port maintained by [email protected]. |
| benchmarks/vkpeak | FreeBSD | 20260527 | benchmarks/vkpeak 20260527: Profile Vulkan devices to find their peak capacities. FreeBSD port maintained by [email protected]. |
| benchmarks/webbench | FreeBSD | 1.5_1 | benchmarks/webbench 1.5_1: Simple forking web benchmark. FreeBSD port maintained by [email protected]. |
| benchmarks/wrk | FreeBSD | 4.2.0_2 | benchmarks/wrk 4.2.0_2: Modern HTTP benchmarking tool. FreeBSD port maintained by [email protected]. |
| biology/R-cran-Biobase | FreeBSD | 2.66.0 | biology/R-cran-Biobase 2.66.0: Base functions for Bioconductor. FreeBSD port maintained by [email protected]. |
| biology/R-cran-BiocGenerics | FreeBSD | 0.52.0 | biology/R-cran-BiocGenerics 0.52.0: S4 generic functions used in Bioconductor. FreeBSD port maintained by [email protected]. |
| biology/R-cran-BiocManager | FreeBSD | 1.30.27 | biology/R-cran-BiocManager 1.30.27: Convenient tool to install and update Bioconductor packages. FreeBSD port maintained by [email protected]. |
| biology/TrimGalore | FreeBSD | 2.3.0_3 | biology/TrimGalore 2.3.0_3: Consistent quality and adapter trimming for next-generation sequencing data. FreeBSD port maintained by [email protected]. |
| biology/abyss | FreeBSD | 2.3.10_1 | biology/abyss 2.3.10_1: Assembly By Short Sequences: parallel, paired-end sequence assembler. FreeBSD port maintained by [email protected]. |
| biology/ad2vcf | FreeBSD | 0.1.6.19 | biology/ad2vcf 0.1.6.19: Add allelic depth info from a SAM stream to a VCF file. FreeBSD port maintained by [email protected]. |
| biology/andi | FreeBSD | 1.15 | biology/andi 1.15: Efficient estimation of evolutionary distances. FreeBSD port maintained by [email protected]. |
| biology/artemis | FreeBSD | 18.2.0 | biology/artemis 18.2.0: DNA sequence viewer and annotation tool. FreeBSD port maintained by [email protected]. |
| biology/atac-seq | FreeBSD | 0.3.1 | biology/atac-seq 0.3.1: Metaport for ATAC-Seq analysis. FreeBSD port maintained by [email protected]. |
| biology/augustus | FreeBSD | 3.5.0_18 | biology/augustus 3.5.0_18: Genome annotation tool. FreeBSD port maintained by [email protected]. |
| biology/avida | FreeBSD | 2.12.4_1 | biology/avida 2.12.4_1: Auto-adaptive genetic system designed for ALife research. FreeBSD port maintained by [email protected]. |
| biology/babel | FreeBSD | 1.6_4 | biology/babel 1.6_4: Converts among various molecular file formats. FreeBSD port maintained by [email protected]. |
| biology/bamtools | FreeBSD | 2.5.3 | biology/bamtools 2.5.3: API and toolkit for handling BAM files. FreeBSD port maintained by [email protected]. |
| biology/bamutil | FreeBSD | 1.0.15 | biology/bamutil 1.0.15: Utilities for working with SAM/BAM files. FreeBSD port maintained by [email protected]. |
| biology/barrnap | FreeBSD | 1.10.6 | biology/barrnap 1.10.6: BAsic Rapid Ribosomal RNA Predictor. FreeBSD port maintained by [email protected]. |
| biology/bbmap | FreeBSD | 40.02 | biology/bbmap 40.02: BBMap short read aligner, and other bioinformatic tools. FreeBSD port maintained by [email protected]. |
| biology/bcf-score | FreeBSD | 1.20_3 | biology/bcf-score 1.20_3: Bcftools plugins for GWAS-VCF summary statistics files. FreeBSD port maintained by [email protected]. |
| biology/bcftools | FreeBSD | 1.24 | biology/bcftools 1.24: Tools for manipulating next-generation sequencing data. FreeBSD port maintained by [email protected]. |
| biology/bedtools | FreeBSD | 2.31.1 | biology/bedtools 2.31.1: Toolset for genome set arithmetic such as intersect, union. FreeBSD port maintained by [email protected]. |
| biology/bfc | FreeBSD | g20150417 | biology/bfc g20150417: Correct sequencing errors from Illumina sequencing data. FreeBSD port maintained by [email protected]. |
| biology/bifrost | FreeBSD | 1.3.9 | biology/bifrost 1.3.9: Parallel construction, indexing and querying of de Bruijn graphs. FreeBSD port maintained by [email protected]. |
| biology/bio-mocha | FreeBSD | 1.22 | biology/bio-mocha 1.22: Bcftools plugin for mosaic chromosomal alteration analysis. FreeBSD port maintained by [email protected]. |
| biology/bioawk | FreeBSD | 1.0.7 | biology/bioawk 1.0.7: BWK awk modified for biological data. FreeBSD port maintained by [email protected]. |
| biology/biococoa | FreeBSD | 2.2.2_9 | biology/biococoa 2.2.2_9: Bioinformatics framework. FreeBSD port maintained by [email protected]. |
| biology/biolibc | FreeBSD | 0.2.7 | biology/biolibc 0.2.7: Low-level high-performance bioinformatics library. FreeBSD port maintained by [email protected]. |
| biology/biolibc-tools | FreeBSD | 0.1.5 | biology/biolibc-tools 0.1.5: High-performance bioinformatics tools based on biolibc. FreeBSD port maintained by [email protected]. |
| biology/bioparser | FreeBSD | 3.1.0 | biology/bioparser 3.1.0: C++ header-only parsing library for several formats in bioinformatics. FreeBSD port maintained by [email protected]. |
| biology/biosig | FreeBSD | 3.9.5 | biology/biosig 3.9.5: Library for reading and writing different biosignal data format. FreeBSD port maintained by [email protected]. |
| biology/biosoup | FreeBSD | 0.11.0_1 | biology/biosoup 0.11.0_1: Collection of C++ header-only data structures for bioinformatics. FreeBSD port maintained by [email protected]. |
| biology/biostar-tools | FreeBSD | 2.1 | biology/biostar-tools 2.1: Meta-port for Biostar Handbook tools. FreeBSD port maintained by [email protected]. |
| biology/bolt-lmm | FreeBSD | 2.5_1 | biology/bolt-lmm 2.5_1: Mixed model association testing and variance component analysis. FreeBSD port maintained by [email protected]. |
| biology/bowtie | FreeBSD | 1.3.1 | biology/bowtie 1.3.1: Ultrafast, memory-efficient short read aligner. FreeBSD port maintained by [email protected]. |
| biology/bowtie2 | FreeBSD | 2.5.5 | biology/bowtie2 2.5.5: Ultrafast, memory-efficient short read aligner. FreeBSD port maintained by [email protected]. |
| biology/btllib | FreeBSD | 1.8.0 | biology/btllib 1.8.0: Bioinformatics Technology Lab common code library. FreeBSD port maintained by [email protected]. |
| biology/bwa | FreeBSD | 0.7.19 | biology/bwa 0.7.19: Burrows-Wheeler sequence aligner. FreeBSD port maintained by [email protected]. |
| biology/canu | FreeBSD | 2.3 | biology/canu 2.3: Single molecule sequence assembler. FreeBSD port maintained by [email protected]. |
| biology/cd-hit | FreeBSD | 4.8.1_3 | biology/cd-hit 4.8.1_3: Clustering and comparing protein or nucleotide sequences. FreeBSD port maintained by [email protected]. |
| biology/cdbfasta | FreeBSD | 2023.07.10 | biology/cdbfasta 2023.07.10: Fast indexing and retrieval of FASTA records from flat file databases. FreeBSD port maintained by [email protected]. |
| biology/chip-seq | FreeBSD | 0.3.1 | biology/chip-seq 0.3.1: Metaport for ChIP-Seq analysis. FreeBSD port maintained by [email protected]. |
| biology/clustal-omega | FreeBSD | 1.2.4 | biology/clustal-omega 1.2.4: Multiple alignment of nucleic acid and protein, replaces clustalw. FreeBSD port maintained by [email protected]. |
| biology/clustalw | FreeBSD | 2.1_3 | biology/clustalw 2.1_3: Multiple alignment program for DNA or proteins. FreeBSD port maintained by [email protected]. |
| biology/coverm | FreeBSD | 0.8.0_3 | biology/coverm 0.8.0_3: Read coverage calculator for metagenomics. FreeBSD port maintained by [email protected]. |
| biology/cufflinks | FreeBSD | 2.2.1.89_15 | biology/cufflinks 2.2.1.89_15: Cufflinks assembles transcripts, estimates their abundance, etc. FreeBSD port maintained by [email protected]. |
| biology/cytoscape | FreeBSD | 3.6.1_2 | biology/cytoscape 3.6.1_2: Software to visualize molecular interaction networks, gene expression. FreeBSD port maintained by [email protected]. |
| biology/diamond | FreeBSD | 2.2.8 | biology/diamond 2.2.8: BLAST-compatible local sequence aligner. FreeBSD port maintained by [email protected]. |
| biology/dsr-pdb | FreeBSD | 1.0.3_19 | biology/dsr-pdb 1.0.3_19: Simple C++ PDB reader (reads the protein description format). FreeBSD port maintained by [email protected]. |
| biology/edlib | FreeBSD | 1.2.7 | biology/edlib 1.2.7: Fast C++ library for sequence alignment using edit distance. FreeBSD port maintained by [email protected]. |
| biology/emboss | FreeBSD | 6.6.0_7 | biology/emboss 6.6.0_7: Collection of open source tools for genetic sequence analysis. FreeBSD port maintained by [email protected]. |
| biology/erminej | FreeBSD | 3.2_2 | biology/erminej 3.2_2: Analyses of gene sets such as gene expression profiling studies. FreeBSD port maintained by [email protected]. |
| biology/exonerate | FreeBSD | 2.4.0_2 | biology/exonerate 2.4.0_2: Generic tool for biological sequence alignment. FreeBSD port maintained by [email protected]. |
| biology/fasda | FreeBSD | 0.2.0.1 | biology/fasda 0.2.0.1: Fast and simple differential analysis. FreeBSD port maintained by [email protected]. |
| biology/fasda-utils | FreeBSD | 0.1.0.2_1 | biology/fasda-utils 0.1.0.2_1: Fast and simple differential analysis extras. FreeBSD port maintained by [email protected]. |
| biology/fasta | FreeBSD | 21.1.1_1 | biology/fasta 21.1.1_1: Collection of programs for searching DNA and protein databases. FreeBSD port maintained by [email protected]. |
| biology/fasta3 | FreeBSD | 36.3.8_1 | biology/fasta3 36.3.8_1: Collection of programs for searching DNA and protein databases. FreeBSD port maintained by [email protected]. |
| biology/fastahack | FreeBSD | 1.0.0 | biology/fastahack 1.0.0: Utility for indexing and sequence extraction from FASTA files. FreeBSD port maintained by [email protected]. |
| biology/fastani | FreeBSD | 1.34_1 | biology/fastani 1.34_1: Fast Whole-Genome Similarity (ANI) Estimation. FreeBSD port maintained by [email protected]. |
BSD Ports